Neisseria sp. KEM232: CGZ77_05305
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Entry
CGZ77_05305 CDS
T05913
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nek
Neisseria sp. KEM232
Pathway
nek03420
Nucleotide excision repair
nek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGZ77_05305
03430 Mismatch repair
CGZ77_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nek03400
]
CGZ77_05305
Enzymes [BR:
nek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGZ77_05305
DNA repair and recombination proteins [BR:
nek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGZ77_05305
MMR (mismatch excision repair)
Other MMR factors
CGZ77_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
DUF943
DUF3553
YccV-like
Motif
Other DBs
NCBI-ProteinID:
ASP17204
LinkDB
All DBs
Position
1070538..1072739
Genome browser
AA seq
733 aa
AA seq
DB search
MFPNESPSALLQNLNPEQLTAVTWPPQSALVLAGAGSGKTRVLTTRIAWLLQTNQASVHS
IMAVTFTNKAAKEMQTRLGAMIPVNVRAMWLGTFHGLCHRFLRLHHRDAGLPASFQILDS
GDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRADALEAPDPHTRRMIECYAEY
DKICQREGVVDFAELMLRSYEMLARNEILRTHYQNRFSHILVDEFQDTNKLQYKWLKLMA
GSHAAVFAVGDDDQSIYRFRGAHVGNMTALMQEFHIDAPVKLEQNYRSVGNILAAANAVI
ENNGDRLGKNLRTDAEAGDKIRFFSAPSDFDEAQFVVEETKALHREGKLLRETAVLYRSN
AQSRVIEQALFRSGLPYKIYGGLRFYERQEIKHALAYLRLAVNPDDDNALLRVINVPPRG
IGARTIENIQTASAETGVSLWQAACAAGAKAAKVAAFVRLIENLRTQVGQMPLAEIMSGI
VRDSGLIEYYQTQKGDHQDRLDNLDELVNAAIAFKPEESNFEILPDNAAADPAFPVLAFL
SNAALESGENQAGEGEDAVQLMTVHAAKGLEFDTVFLTGMEEGRFPSELSLAERGGLEEE
RRLMYVAITRARKRLYISMAQQRMLHGQTQFGVVSRFVEEIPPQVLHFLSPPKTATFADA
PQTRRSDIRASESYQPAQSYAGFRIGQNVRHAKFGTGVIIDAADKGQSARLTINFGKQGV
KELDTAFAKLEAV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccaacgaatccccctccgccctgctgcaaaacctcaatcccgaacagctcacc
gccgtaacctggccgccgcaatccgcgctcgttttggcgggcgcgggcagcggcaaaacg
cgggtgctcaccacgcgaatcgcctggcttttgcagaccaaccaggccagcgtgcacagc
atcatggcggtaacgtttaccaacaaggccgccaaagaaatgcagacgcggctgggcgcg
atgattccggtaaacgtgcgcgccatgtggctgggcacgttccacggcctgtgccaccgc
tttttgcgcctgcaccaccgcgacgcgggtctgcccgcctcgtttcagattctcgacagc
ggcgaccagctctcgctcatcaaacgcctgctcaaaagcctcaacatcgccgaagaaatc
atcgcgccgcgctcattgcagggctttatcaacgcgcaaaaagaaagcggcctgcgtgcc
gacgcgctcgaagcgcccgacccgcacacgcgccgcatgatcgagtgctacgccgaatac
gacaaaatatgccagcgcgaaggtgtagtcgattttgccgagctgatgctgcgaagctac
gaaatgctggcgcgcaacgaaatcctgcgtacgcactaccaaaaccgtttcagccatatt
ctggttgacgaattccaagacaccaacaagctgcaatacaaatggctcaagctgatggcg
ggcagccacgccgccgtgtttgccgtgggcgacgacgaccagagcatctaccgctttcgc
ggcgcacacgtcggcaacatgaccgcgctgatgcaggaatttcacatcgacgcgccagtg
aaactcgaacaaaactaccgctcggtgggcaacattcttgctgccgccaacgccgtgatt
gaaaacaacggcgatcgtttgggcaaaaacctgcgcaccgatgccgaagcgggcgacaaa
atccgctttttctccgcgccctccgattttgacgaagcgcagtttgtcgttgaagaaacc
aaagccctgcaccgcgaaggcaagctgttgcgcgaaaccgccgtgctctaccgcagcaat
gcccaatcgcgcgtgatcgaacaagccctgttccgcagcggcctgccctacaaaatctac
ggcggcctgcgcttttacgagcggcaggaaatcaaacacgcccttgcctacctgcgtctg
gcggtcaatcccgacgacgacaacgccctgttgcgcgtaatcaatgtaccgccgcgcggc
atcggcgcgcgcacgattgaaaacattcagacggcctctgccgaaaccggtgtgtcgctg
tggcaggccgcctgcgccgccggtgcgaaagccgccaaagtggccgccttcgtgcgcctg
atcgaaaacctgcgcacccaagtcggccaaatgccgctggccgaaatcatgtccggcatc
gtgcgcgacagcggccttatcgagtattaccaaacgcaaaaaggcgaccaccaagaccgt
ttggacaacctcgacgaactggtcaacgccgccatcgcgttcaagcccgaagagagcaat
tttgaaatcctgcccgacaacgccgccgccgacccggcctttcccgtgctggcctttttg
agcaacgccgcgctcgaatcgggcgaaaaccaggcgggcgaaggcgaagacgcggtgcag
ctgatgaccgtgcacgccgccaaaggcttggaatttgacaccgtgttcctcaccggcatg
gaagaaggccgcttccccagcgaactctcgctggccgagcgcggcggcctcgaagaagaa
cgccgtttgatgtacgttgccatcacgcgcgcgcgcaaacggctgtatatcagcatggcg
caacagcggatgctgcacggccaaacccaattcggcgtggtgtcgcgctttgtcgaagaa
atcccgccccaagtgctgcactttctctcgccgccaaaaaccgctactttcgccgacgcg
ccccaaacgcgccgcagcgacatacgcgcctccgaaagctaccaaccggcgcaaagctac
gcgggtttccgcatcggccaaaacgtgcgccacgccaaattcggcacaggcgtgattatc
gacgccgccgacaagggccaatccgcccgcctgaccatcaatttcggcaaacagggcgtg
aaagaactggataccgcgtttgccaaattagaggccgtctga
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