Neisseria sp. KEM232: CGZ77_06340
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Entry
CGZ77_06340 CDS
T05913
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nek
Neisseria sp. KEM232
Pathway
nek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGZ77_06340 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nek03400
]
CGZ77_06340 (recD)
Enzymes [BR:
nek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CGZ77_06340 (recD)
DNA repair and recombination proteins [BR:
nek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGZ77_06340 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
NAT10_TcmA_helicase
SH3_13
UvrD-helicase
nSTAND3
SLFN-g3_helicase
T2SSE
PhoH
SRP54
NTPase_1
AAA_28
AAA_25
AAA_29
PIF1
TrwB_AAD_bind
AAA_5
ATPase
DEAD
AAA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ASP17396
LinkDB
All DBs
Position
1275754..1277469
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AA seq
571 aa
AA seq
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MSDNEFRNAAADAALDVLQRLFPEAAAVCAPFLPRLFSALDDGHSFIWLNDAEAEALDSA
APLADGTGRGPLVLRGRRLFLGRLWQLENDLAGEIRRLAAAPAAPADMRAAAENLGLWFD
GAGSEGQQAAAALALLQNFMLITGGPGTGKTTTVAKLLALLCSGADSLPRIALAAPTGKA
AAHMGNALHAALGRFPLSDGLKERLSALEGQTVHRLLKLRPPQMRPQFDAARPLPLDILV
VDEASMLDLALMLDLLRAVPDGCRVILLGDENQLPSVGAGAVLAALARPTVLDADTAGRL
KTLLPDAAERFQTASNAPPLSANTARLTVSHRFGEHSGLGALARAVCAGDAAGAEDAFAR
FPEELSFADGGAERLAERFCRTQAAFWQAADAADPAAAFACQSRLTVLAARRGDAERFNE
ACRRILLREGRAREDRAWFAGQILMVERNDYAMGLFNGDIGIVMPDPHGSDGLSVRFPAG
GGFRSVPLSRLPAHSSAFAVTVHKSQGSEYGEVWLLAPEGGGEGFNRSLLYTAVTRARER
FVYAGSRESFAAACANAETRRTALREFLAAG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaacgaattccgcaacgccgccgccgatgctgcgctcgacgtgctgcaacgc
ctgtttcccgaagccgccgccgtgtgcgcgccttttctgccgcgcctgttttccgccctc
gacgacggtcacagttttatttggctgaacgacgcggaggccgaagcgcttgatagcgcc
gcgccgctggccgacggcacgggcagggggccgctggtgttgcgcgggcggcggctgttt
ctcggacgcctgtggcagctggaaaacgatttggcgggcgaaatccgccgcctcgccgcc
gcgcccgccgcgcctgccgatatgcgggcggcggcggaaaacctcggcctgtggtttgac
ggtgcgggcagcgaagggcagcaggccgccgccgcgctggcgctgctgcaaaactttatg
ctgattaccggcgggccgggcacgggcaaaaccaccaccgtcgccaagctgctcgccctt
ttgtgttcgggcgccgactctctgccgcgcatcgcgctggccgcgccgacgggcaaggcg
gcggcgcatatgggcaacgcgctgcacgcggcgctcggccgtttcccgctttcagacggc
ctcaaagagcggttgtctgccctcgaagggcaaaccgtccaccgcctgctgaaactgcgt
ccgccgcagatgcggccgcagtttgacgccgcccgcccgctgccgctggatattttggtg
gtggacgaagcctcgatgctcgatctggcgctgatgctcgatctgctgcgcgccgtgccc
gacggttgccgcgtgattctgttgggcgacgaaaaccagcttccttccgtcggcgcgggt
gcggtgctggcggcgctggcgcggccgaccgtgctcgatgccgacaccgcaggccgtctg
aaaaccctgctgcccgatgccgcagagcgttttcagacggcctcaaacgcgccgcccctg
tcggccaataccgcccgcctcaccgtcagccaccgcttcggcgaacacagcggtttgggc
gcgctggcgcgggcggtgtgcgcgggcgatgcggcgggagcggaagacgccttcgcccgt
ttccccgaagaattgtcgtttgccgatggcggcgccgaacgtttggcggagcgtttctgc
cgcacgcaggcggcgttttggcaggcggccgatgccgccgatcctgccgccgcttttgcc
tgccagagccgcctcaccgtgctggccgcgcggcgcggcgacgccgaacgttttaacgaa
gcctgccgccgcattctgctgcgcgaagggcgcgcgcgcgaagacagggcgtggtttgcc
ggacaaatcctgatggtggagcgcaacgattacgcgatggggctgtttaacggcgacatc
ggcattgtgatgcccgacccgcacggctcggacggcctgtcggtgcggtttcccgcaggc
ggcggtttccgcagcgtgccgctcagccgcctgcccgcgcacagcagcgcgtttgccgtg
accgtgcacaaaagccagggctcggaatacggcgaagtgtggctgctcgcgcccgaaggc
ggcggagagggtttcaaccgttccctgctgtacaccgccgtcacccgcgcgcgcgaacgc
tttgtatacgcaggcagccgcgaatccttcgccgccgcctgcgccaacgccgaaacccgc
cgcaccgccctgcgcgaatttttggcggcagggtag
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