KEGG   Neisseria sp. KEM232: CGZ77_11560
Entry
CGZ77_11560       CDS       T05913                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
nek  Neisseria sp. KEM232
Pathway
nek03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nek00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CGZ77_11560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nek03400]
    CGZ77_11560
DNA repair and recombination proteins [BR:nek03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CGZ77_11560
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CGZ77_11560
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_29 AAA_16 AAA_23 RsgA_GTPase nSTAND1 AAA_22 AAA_25 DnaJ_CXXCXGXG nSTAND3 Viral_helicase1 cobW T2SSE
Other DBs
NCBI-ProteinID: ASP18298
LinkDB
Position
2316287..2319124
AA seq 945 aa
MCKNHHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLSGSGKSSLAFDTLYAEGQRRY
VESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLYA
RVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVMILAPAVRERKGEFVDFFADLQAQG
FARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGNERAL
AMEMDSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFDPEKVV
AHPELSLATGAIDGWDKRNQFYFQMIQSLSRHYGFDVQAAWETLPEKVKKVILHGSGKEV
IDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNHRACPSCGGARLR
KEARYVYVSGEPLHEVSAWPLTKTHQFFETLDLDGNKKQIAEKILKEITERLGFLINVGL
DYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLR
DLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCEQSITGQYLSGK
KSIAVPSERTPVNPDRMLVLKGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLA
KITARELNRAQEEPAPYDDIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFA
GVPLSRERGYSVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETL
EIQYKGKDISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQ
RVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIK
TADWIVDLGPEGGDGGGRIVACGTPEEVGQVEGSYTGIYLKKTLN
NT seq 2838 nt   +upstreamnt  +downstreamnt
atgtgcaaaaaccatcacgacaacgacaccatccgcatccgcggcgcgcgcacgcataat
ttgaaaaacatcgatttggacattccgcgccacaagctggtggtggtcacggggctgtcg
ggcagcggcaaatcgtcgctggcgtttgacacgctgtatgccgaagggcagcggcgttat
gtcgagagcctgtctgcctatgcgcggcagtttttgcagatgatggacaaacccgatgtc
gatttgatcgaaggcttatcgcccgcgatttccatcgagcagaaatccaccagccacaat
ccgcgttccaccgtcggcacggtaacggaaatccacgattacctgcgccttttgtacgcc
cgcgtcggcacgccgtattgccccgaacacaatctgccgttgtcgagccagaccgtgtcg
cagatggtcgatgccgtcttgaagctgccggaagacacgcgcgtgatgattctggcgccg
gcggtacgcgagcgtaagggtgagtttgtcgatttctttgccgacttgcaggcgcaaggc
tttgcgcgggtgcgcgtggacggcgaagtttatcaacttgacgaagtaccaaagctggaa
aaaaacatcaaacacaatatcgacgtggtcatcgaccgcgtgaaagtgaaggcggacatc
aagcagcggctggcggaaagttttgaaaccgcgctgcgccacggcaacgagcgcgcgctg
gcgatggagatggacagcggcgaagagcattggttttccgcacgtttcgcctgccccgtg
tgttcgtacagcctgcctgaattagagccgcgcctcttttcattcaacaacccgatgggt
tcctgcccgacttgcgacggcttgggcaacaccaatttcttcgaccccgaaaaagtggtc
gcccatcccgaattgtcgctcgcaacgggcgcgattgacggctgggacaagcgcaaccag
ttctatttccaaatgattcagtcgctttcgcggcattacggtttcgatgtgcaggctgct
tgggaaacgctacctgaaaaagtcaaaaaagtcatcctgcacggctcgggcaaagaagtc
attgatttcacttacctgtccgaacgcggcaccaccttcaaccgcagccacgccttcgaa
ggcatcatccccaatctcgaacgccgctaccgcgaaaccgacagcgaaaccgtgcgcgaa
aaactgcgcgaataccaaaaccaccgcgcttgcccgagctgcggcggcgcacgtttgcgc
aaagaagcgcgctacgtttacgtcagcggcgaacctttgcacgaagtctccgcctggccg
ctgaccaaaacccaccaattctttgaaaccttggatttggacggcaacaaaaaacaaatc
gccgaaaaaatcctcaaagaaatcaccgagcgtctcggtttcctgattaacgtcgggctg
gattacctgaacttgagtcgctccgccgaaaccctttccggcggcgaagcccagcgcatc
cgtctcgccagccaaatcggcagcggcctgaccggcgtgatgtacgttttggacgaaccc
tccatcggcctgcaccagcgcgacaacgaccgcctactcgccaccctcaaacgcctgcgc
gatttgggcaacagcgtgattgtggtcgaacacgacgaagacgccatccgcgaagccgat
ttcgtcgtcgatatgggcccgggcgcaggcgaacacggcggtaacgtattgattgccgat
acgcccgaaaacgtcgccaaatgcgagcaatccattaccggacaatacctcagcggcaaa
aaatccattgccgtgccgtctgaacgcacacccgtcaatcctgaccgaatgctcgtcctc
aaaggcgcgcgcggcaacaacctcaaaaacgttaccctcgaactgccgctcggtttgatt
acctgcatcaccggcgtatccggcagcggcaagtccaccctgattaacgacaccctcgcc
aaaatcaccgcccgcgaactcaaccgcgcccaagaagaacccgccccatacgacgacatc
cgcggcctcgaacacctcgacaaagtcatcaacgtcgaccaatcccccatcggacgcaca
ccgcgctccaatcccgccacctacaccggcctgttcacccccattcgcgaactcttcgcc
ggcgtacccctctcgcgcgaacgcggctacagcgtcggcagattctccttcaacgtcaaa
ggcggccgctgcgaagcctgccaaggcgacggcgtgattaaagtcgaaatgcacttcctg
cccgacgtgtacgtcccctgcgaagtctgccacggcaaacgctacaaccgcgaaacgctc
gaaatccaatacaaaggcaaagacatcagccaagtcctcgacatgaccgtcgaagaagcc
cgcgaatttttcgacgccgtccccaccgtatcgcgcaaactgcaaaccctgatggacgta
ggcctaggctacatccgcctcggacagtccgccaccaccctctccggcggcgaagcccaa
cgcgttaaactcgccctagagctatccaaacgcgacaccggcagaacgctctacatcctc
gacgaacccaccaccggcctgcacttcgccgacatcgccctgctgctggaagtgataggc
cgtctgaaaggcaaaggcaactccattgtgattattgagcacaatttggacgtgattaaa
accgcggattggattgtggatttagggcccgaggggggggatggcggggggaggattgtg
gcttgtggaacacctgaagaagttggccaagtggaggggagttatactgggatatatttg
aaaaaaacattaaactag

DBGET integrated database retrieval system