Neisseria elongata: NELON_08430
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Entry
NELON_08430 CDS
T03569
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nel
Neisseria elongata
Pathway
nel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NELON_08430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nel03400
]
NELON_08430
Enzymes [BR:
nel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NELON_08430
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NELON_08430
DNA repair and recombination proteins [BR:
nel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NELON_08430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AJE18915
UniProt:
D4DVA7
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All DBs
Position
1605048..1605869
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AA seq
273 aa
AA seq
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MPELPEVETTLRGIAPHISGKTIVRTTVRQAKLRHPVPPDLDDTLNGETVLRCTRRAKYL
LVHLPQGILLIHLGMSGSLRLFTSGNAPDAGKHDHVEIEFSDGTLLRYHDPRRFGIVSWY
PGPEETHPLLQNLAPEPLGNGFTADYLHNALKKRRSPIKSVLMDNKTVVGVGNIYANESL
FAAGIAPNRPAMQISRKEAAALVHHIRETLRRAIEKGGSTLRDFVDSEGKSGYFQQEYKV
YGRQGQPCLQCGGGIEKTVIGQRGTFYCPNCQH
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaaaccaccctgcgcggcatcgcgccccacatcagcggc
aaaaccatcgtccgcaccaccgtccgccaagcgaaactgcgccaccccgtcccgcccgat
ttggacgacaccctcaacggcgaaaccgtcctgcgctgcacgcggcgcgccaaatacctg
ctcgtccatcttccccaaggcatcctgctcatccacctcggcatgtccggcagcctgcgc
ctatttacctccggaaacgcccccgacgcaggaaaacacgaccatgtcgaaatagaattt
tcagacggcaccttactgcgctaccacgacccgcgccgtttcggcatcgtctcatggtat
cccggtccggaagaaacccaccccctgctgcaaaacctcgcacccgaaccgctgggcaac
ggctttaccgccgactacctccacaacgccctgaaaaaacgccgcagcccgataaaaagc
gtattgatggacaacaaaaccgtcgtcggcgtaggcaacatctacgccaacgaaagcctg
ttcgccgccggcatcgccccaaaccgccccgccatgcaaatcagccgcaaagaagcggcg
gcactggtacaccacatccgcgaaaccctgcgccgcgccatcgaaaaaggcggcagcacc
ctgcgcgacttcgtcgacagcgaaggcaaaagcggctacttccaacaagaatacaaagtc
tacggtcgccaaggccaaccctgcctgcaatgcggcggcggcatcgaaaagaccgtcatc
ggccaacgcggcacattctactgtcctaactgccagcactaa
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