Neorhizobium sp. NCHU2750: NCHU2750_13980
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Entry
NCHU2750_13980 CDS
T05650
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCHU2750_13980 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nen03021
]
NCHU2750_13980 (rpoA)
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_13980 (rpoA)
Enzymes [BR:
nen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCHU2750_13980 (rpoA)
Transcription machinery [BR:
nen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCHU2750_13980 (rpoA)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCHU2750_13980 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
McdB_C
IDH
Motif
Other DBs
NCBI-ProteinID:
AYD00789
LinkDB
All DBs
Position
1441698..1442708
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDPKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDDGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIETDGSVTGEDAVAFAARILQDQLAVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaagaactggcaggaactgattaagccgaacaaggtggaattcacctcgtcc
ggtcgcaccaaggcaacgctggttgccgaaccccttgagcgcggcttcggcctgacgctc
ggcaacgcgctgcgtcgcgtgcttctgtcgtcgctccgcggtgctgctgtcacggcagtc
cagatcgacggcgttctgcacgagttctcctccatcccgggcgtccgggaagatgtgacg
gacatcgtgctcaacatcaaggaaatcgccatcaagatggacggcgatgatccgaagcgc
atggtcgtgcgcaagcagggccctggtgccgtgaccgctggcgatatccagacggttggc
gacatcgagatcctgaaccccgaccacgtgatctgcacgctggacgacggcgcggagatc
cgcatggaattcacggtcaacaacggcaagggctacgtcccggccgagcgtaaccgtgca
gaggatgccccgatcggcttgatcccggtcgacagcctctactcgccggtcaagaaagtg
tcctacaaggtggaaaacacccgcgaaggccaggttctcgactacgacaagctgaccatg
accatcgaaaccgatggctcggtcacgggtgaagacgccgtagccttcgccgctcgcatc
cttcaggatcagcttgctgtattcgtcaacttcgacgaaccgcagaaggaagctgaagag
gaatcggtcactgaactcgcgttcaacccggctctcctcaagaaggtcgacgaactggaa
ctctccgtccgttcggccaactgcctgaagaacgacaacatcgtttatatcggcgacctc
atccagaagaccgaggcggaaatgctgcgcactccgaatttcggtcgcaagtcgctgaac
gagatcaaggaagttctggcatccatgggcctccatcttggtatggaagttcctgcatgg
ccgccggaaaacatcgaagacctcgctaagcgttacgaagaccagtactaa
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