Neorhizobium sp. NCHU2750: NCHU2750_16440
Help
Entry
NCHU2750_16440 CDS
T05650
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCHU2750_16440 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_16440 (uvrB)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCHU2750_16440 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCHU2750_16440 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
Microtub_bd
SWI2_SNF2
Selenoprotein_S
Motif
Other DBs
NCBI-ProteinID:
AYD01034
LinkDB
All DBs
Position
complement(1684443..1687493)
Genome browser
AA seq
1016 aa
AA seq
DB search
MARSPKKSAPSPANGFEEAPQSAFEGAPLEGSVSDWVKQLEAEAEASGIETQREIASKAG
KHRKKIEIAAREQAIREAEEARKAAGKSGGKSAPKTAKNTTASKTARGVSIGASSDPKTR
AAAGLNPVAGLDISLEDAQSLAPGAVTATVDALSKLIESGNPLFKNGEIWTPHRPERPAK
SEGGIAIEMVTDYKPSGDQPTAIADLVEGLNSGDRSQVLLGVTGSGKTFTMAKVIEATQR
PAVILAPNKTLAAQLYSEFKNFFPNNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQ
IDRMRHAATRAILERDDCIIVASVSCIYGIGSVETYTAMTFQMTVGDGLDQRQLLADLVA
QQYKRQDINFVRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDAITEFDPLTGAKTGDL
KSVKIYANSHYVTPRPTLNGAIKSIKEELKIRLAELEKAGRLLEAQRLEQRTRYDVEMME
ATGSCAGIENYSRYLTGRKPGEPPPTLFEYIPDNALVFIDESHVTIPQIGGMYRGDFRRK
ATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTVSVSATPGNWEMEESGGVFAEQVIRPTGL
IDPPVEVRSARSQVDDVLGEIRETAARGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHS
DIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQT
IGRAARNVDGKVILYADNITGSMKRAMEETTRRREKQMAYNTEHGITPESVKARISDILD
SVYERDHVRADISGASGKGFADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDE
IKRLKAAELATMDDPIARDEAKGQEGGRGKSGSGGRRGSSSPLAGEDSSPREAQPSGSAN
LVRGETEQASYFAKPSLDDMGPGTDTARPLFRKNTLDEMTVGRTEKPVTGKLPDKPTTEP
GKRFSPLLESQPERGSPDRDDPRPVVRGKIGAGSYEDAGEQRRKGRTKGKTGRPGQ
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggccagatccccgaaaaaatccgccccctcgcccgccaacggtttcgaggaagctccc
cagtcagctttcgaaggtgccccgctcgagggtagcgtttccgactgggtgaagcagctc
gaggcggaggcggaagcgtccggcatcgagacccaacgcgagatcgcctccaaggcgggc
aagcaccgcaagaagatcgagatcgcggcacgcgagcaggcgatccgcgaggcggaggaa
gccaggaaggccgcgggcaaatccggcggcaagagcgccccgaagacagcgaagaacacc
accgcatcgaagacggcccgcggcgtgtcgatcggtgcgtcctccgacccgaagacgcgc
gctgccgccggcctcaatccggtcgccggcctcgacatttcgctggaggacgcccagtcg
cttgcgccgggcgccgtcacggccacggtcgatgcgctgtcgaagctgatcgagagcggc
aatccgctgttcaagaacggcgagatctggacgccgcatcggccggaacgcccggcaaag
tccgagggcggcatcgccatcgagatggtcaccgactacaagccctcgggcgaccagccg
acggcgattgccgatctggtcgaggggctgaattccggcgaccgcagccaggtcctgctc
ggcgtcaccggctcgggcaagaccttcaccatggccaaggtgatcgaggcgacgcagcgt
ccggccgtcatcctcgcccccaacaagacgctcgcggcgcagctctattccgagttcaag
aatttcttccccaataatgcggtggaatatttcgtctcctactacgactattaccagccg
gaagcctatgtgccgcgctccgacacgttcatcgagaaggaaagttcgatcaacgaacag
atcgaccggatgcgccacgccgccacccgcgccatcctggagcgcgacgactgcatcatc
gtcgcctcggtttcctgcatctacggtatcggctcggtcgagacctatacggcgatgacc
ttccagatgacggtcggtgacgggctggaccagcgccagctgctcgccgacctcgtcgcc
cagcaatacaagcggcaggacatcaatttcgtccgcggctcgttccgggtccgtggcgac
acgatcgagatcttccccgcccaccttgaagatgccgcctggcggatctcgatgttcggc
gacgagatcgacgcgatcaccgaattcgacccgctgaccggcgccaagaccggcgacctg
aaatcggtcaagatctacgccaattcgcactatgtgacgccgcgcccgacgctgaacggg
gcgatcaagtcgatcaaggaagagctgaagatccgcctcgccgagctggaaaaggccggc
cgcctgctggaagcccagcggctggaacagcgcacccgctatgatgtggagatgatggag
gcgaccggctcctgcgctggcatcgagaactattcgcgctatctcaccggccgcaagccg
ggcgagccgccgccgaccctgttcgaatatatccccgacaatgcgctggtcttcatcgac
gaaagccatgtcaccatcccgcagatcggcggcatgtatcgcggcgacttccgccgcaag
gcgacgctggccgaatacggtttccgcctgccctcctgcatggacaaccggccgctgcgt
ttcgaggaatgggacgcgatgcgaccgcagaccgtctccgtctcggcgacgcccggcaat
tgggaaatggaggaatccggcggcgtcttcgccgaacaggtgatccgcccgaccggcctc
atcgatccgccggtggaagtgcggtccgcccgcagccaggtcgacgacgtgctcggcgaa
atccgcgagacggcggccaggggctatcgcacgctctgcaccgtgctgaccaagcggatg
gcggaggacctgaccgaatacctgcatgaacagggtgtgcgcgtgcgctacatgcactcg
gatatcgacacgctggaacgcatcgagatcatccgcgacctgcggctcggcgccttcgac
gtgctggtcggcatcaacctgttgcgcgaaggcctcgacattcccgaatgcggcttcgtc
gccattctcgatgccgacaaggaaggttttctccggtcggagacatcgctgatccagacc
atcggacgcgcggcgcgcaatgtcgatggaaaggtcatcctttatgccgacaatatcacc
ggctcgatgaaacgggcgatggaggaaaccacccgccgccgcgaaaagcagatggcctat
aataccgaacacggcatcacgccggaatcggtgaaggcgcggatttccgacattctcgac
agtgtctacgagcgcgaccatgtgcgcgccgacatttccggcgccagcggcaagggcttt
gccgatggcggccatctggtcggcaacaatctccaggcacatctcaacgcgctggaaaaa
tcgatgcgcgacgccgcagccgatctcgacttcgaaaaagccgcccgcctgcgcgacgaa
atcaagcgcctcaaggccgccgaactggcgacgatggacgatccgattgcacgggacgag
gcgaagggacaggaaggcggccgaggcaagagtggttcgggcggtcgccgcgggtcttcc
tctccccttgcgggagaggatagttcgccccgcgaggcgcagccgagtggttcggcgaac
ttggtgaggggtgaaacggagcaggcctcctatttcgccaaaccctcgctcgacgacatg
ggcccgggcaccgacacggcgcggcctcttttccgcaagaacacgctcgacgaaatgacc
gtcggccgcacggaaaaaccggttacgggcaagcttcccgacaagccgacaaccgaaccc
ggcaaacgtttttcaccgcttctggaaagccagcccgaacggggctcgccggacagggac
gacccgcgcccggtggtgcgcggcaagatcggcgccggaagctacgaggatgctggtgag
cagagacgcaaaggacggacgaaggggaagaccgggcggccggggcagtga
DBGET
integrated database retrieval system
