Neorhizobium sp. NCHU2750: NCHU2750_17610
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Entry
NCHU2750_17610 CDS
T05650
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCHU2750_17610 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_17610 (uvrA)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCHU2750_17610 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCHU2750_17610 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_29
nSTAND1
AAA_16
AAA_33
AAA_21
CA109-like
Motif
Other DBs
NCBI-ProteinID:
AYD01149
LinkDB
All DBs
Position
complement(1812222..1815143)
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNSLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRVLAFEEGTRLYILAPMIRGRKGEYKKELADLMKKGFQRV
KVDGQFYEIADVPALDKKYKHDIDVVVDRLVVRADIGARLADSLETSLKLADGLAVAEFA
DKPLPANETAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGSQQKVDENLIVPEPGRTLKDGAIAPWAKSSSPYYNQTLEGLGKVFGFKLSDRWDK
LSKAAQDAILKGTEEKIEFNYADGARSYKTVKTFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINKLHIGEATEMSIKVARDWFSGLPEHLNAKQNEIAVR
ILKEIRERLQFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGTVVAEGTPS
QVMANPKSLTGKYLSGELGVAVPAERRKPKKGKELKVFGARGNNLKNVTAAVPLGVFTAV
TGVSGGGKSTFLIETLYKSAARRVMGAREIPAEHDRIDGFEHIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVHFKGKSIADVLDMTVEEGVEFFSAVPAVRDKLQSLFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEMLHELV
NQGNSVIVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEQIVKEERSYTGHFLKEL
LERRPVKKVQAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcaagaccatttccatacgtggtgcacgcgagcacaatttgaagggcatc
gatctcgacctgccccgcaattcgctgatcgtgatgaccggcttgtcggggtccggcaaa
tcctcgcttgccttcgacacgatctatgcggaaggccagcggcgttatgtggaaagcctg
tcggcctatgcgcgacagttcctggaaatgatgcagaagccagatgtcgaccagatcgag
ggcctgtcgccggcgatctcgatcgagcagaagacgacctcgcgcaatccgcgctcgacg
gtcggcacggttaccgagatctacgactatatgcgtctgctcttcgcccgcgtcggcgtg
ccctattctccggcgacggggcttccgatcgaaagccagacggtcagccagatggtcgac
cgggtgctggccttcgaggaaggaacgcgcctctacatccttgcgccgatgatccgcggc
cgcaagggcgagtacaagaaggaactcgccgacctgatgaagaagggctttcagcgcgtc
aaggtggatggccagttctacgagattgccgatgttccggcactcgacaagaaatacaag
cacgacatcgacgtcgtcgtcgaccgcctcgtggtgcgggcggatatcggtgcgcgcctg
gcggacagccttgaaacttcgctgaagcttgccgatggcctggccgtggcggaattcgcc
gacaagcccctgcccgccaatgaaactgcagccggtggctccgccaacaagtcgctcaac
gagacccatgaacgggttctattctcggaaaaattcgcctgcccggtttccggcttcacc
attccggagatcgagccgcggctgttttcgttcaacaatccgttcggcgcctgcccgacc
tgcgacggcctcggttcgcagcagaaggtggacgagaacctgatcgtgccggaaccgggg
cgcacgctgaaggacggtgccatcgcgccctgggccaagtcgtcgtcgccctattacaac
cagacgctcgaaggtctcggcaaggtgttcggcttcaagctgtcggaccgctgggacaag
ctctccaaggcggcacaggacgcgatcctcaagggtaccgaggaaaagatcgagttcaac
tatgccgatggcgcacgctcctacaagacggtgaagaccttcgagggtatcgttcccaat
cttgagcgccgctggaaggagaccgacagcgcctgggcgcgcgaagaaatcgagcgctac
atgtcggcagccccctgcccggcctgcgccggctatcgccttaagcccgaagcgctggcg
gtgaagatcaacaaactgcatatcggcgaagccaccgaaatgtcgatcaaggtggcgcgc
gactggttttccggcctgccggaacatctgaatgccaagcagaacgagatcgcggtgcgt
atcctcaaggagatccgcgagcggctgcagttcctcaacgatgtcggcctcgactatctg
agcctgtcgcgcaactccggcacgctgtcgggcggcgaaagccagcgcatccggcttgcc
tcgcagatcggctcgggcctcacgggcgttctttacgtgctcgacgagccgtcgatcggc
ctgcaccagcgcgacaatgcccgcctcctcgacacgctgaagcatctgcgcgacatcggc
aataccgtgatcgtcgtcgagcatgacgaggatgcgatcctgacggccgattatgtcgtc
gatatcggaccggcggccggcattcatggcggcacggtggtggccgagggcacgccgagc
caggtgatggccaatccgaagtcattgaccggtaaatacctgtcgggcgagctcggcgtt
gcggttccggccgagcggcgcaagcccaagaagggcaaggaactcaaggttttcggcgcg
cgcggcaacaatctgaagaatgtcaccgcagcggttccgcttggcgtgttcacggcagtc
accggcgtatcgggcggcggcaagtccacgttcctgatcgagacgctctataagtcggcc
gcacgccgcgtcatgggggcgcgcgaaattccggccgagcatgaccggatcgacgggttc
gagcatatcgacaaggtgatcgatatcgaccagtcgccgatcggccgtacgccgcgctcc
aacccggccacctataccggcgccttcacgccgatccgtgactggtttgccggcctgcca
gaggccaaggcacgcggctatgcgcccggccgcttctccttcaacgtcaagggcggccgt
tgcgaggcctgccagggcgacggggtgatcaagatcgagatgcatttcctgccggatgtc
tacgtcacctgcgacgtctgccacggcaagcgttacaatcgcgagacgctggacgtgcat
ttcaagggaaagtcgattgccgacgtgctcgacatgacggtcgaggaaggcgtcgagttc
ttctcggcggtgccggcggtgcgcgacaagctgcagtcgctgttcgatgtcggtctcggc
tatatcaaggtcggccagcaggccaatacgctgtccggcggcgaggcgcagcgcgtcaag
ctcgccaaggaattgtcgaagcgctcgacgggacgcacgctctacattctcgacgagccg
accaccggcctgcatttccatgacgtggcgaaacttctagaaatgctgcacgagttggtc
aaccaaggcaattccgttatcgtcatcgaacacaatctggaggtcatcaagacggccgac
tggatcatcgatatcggtcccgaaggcggaaccggcggcggcgaagtggtcgccaccggc
acgcccgaacagatcgtcaaggaggagcgctcctataccgggcacttcctcaaggagttg
ctggaacgccggccggtgaaaaaggtgcaggcggcggaatag
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