Neorhizobium sp. NCHU2750: NCHU2750_20980
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Entry
NCHU2750_20980 CDS
T05650
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03420
Nucleotide excision repair
nen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCHU2750_20980 (uvrD)
03430 Mismatch repair
NCHU2750_20980 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_20980 (uvrD)
Enzymes [BR:
nen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCHU2750_20980 (uvrD)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCHU2750_20980 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCHU2750_20980 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYD01483
LinkDB
All DBs
Position
2165784..2168453
Genome browser
AA seq
889 aa
AA seq
DB search
MPRLPKSPPGHRFPPRIRNETRTLSGLSASNHYIGRMSNSFDDIPFFDEEPEPAPRKPQQ
ATDRQQPATSGPAACGPMAGGPMTGGLGIAARAMAARDGARPAPDYLTGLNPEQREAVET
LDGPVLVLAGAGTGKTRVLTTRIAHILETNRAFPSQILAVTFTNKAAREMKERIGVLVGG
AVEGMPWLGTFHSIGVKILRRHAELVGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPA
KQFAGMIDGWKNKGLLPHDIPEGDARAFANGKGRELYAAYQARLRTLNACDFGDLLLHPI
AIFRKTPDLLKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRPKGVPQNVCCVGDDDQSI
YGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKTLFTDRV
DPDDEKVIVHAAWDSEEEARAVGEEIERLQRGDNTNGDGKKHALNDMAILVRASFQMREF
EDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIINTPKRGLGDTTV
RYLHDYARARDIPMLQAAADIIETDELKPKARKALFDVIQSFRNWQERLENTEHTELAEQ
ILEESGYTDMWKNDKSAEAPGRLDNLKELIRSMEAFESMRGFLEHVSLVMDAEQNENMDA
VSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKRRCH
IWFVSNRRIHGLWQSTMPSRFLDELPPSHVDVAASDSSNSYGGYGGRGGYGQSRFDKADP
FANSYSTPGWKRAQANKTEATRDNWGSRSGHAVERIGYGESGPRGRTIDGELVAKSVAET
PSKFLVGDRVFHIKFGNGNISAIEGNKLTIEFDRAGQKRVLDGFVEKAG
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggctgccgaaatctccgcccggccacagatttccgccccggatccggaatgaa
accagaacattatctggtctttcggcctcgaatcactacattggccgcatgagtaacagt
ttcgacgacatcccgttcttcgacgaagagccggaacccgcgccccgcaagccgcagcag
gccacggaccgccagcagccggccacgagcggcccggcagcctgtgggcctatggcgggt
gggcctatgacaggtggattgggcattgccgcccgtgccatggcggcgcgcgatggcgca
cgcccggccccggactatctgaccggcctcaacccggaacagcgcgaggctgtcgaaacg
ctggatggccccgtcctcgtcctggccggcgccggcaccggcaagacccgcgtgctgacc
acccgcatcgcccatattctggaaaccaaccgcgccttcccgagccagatcctcgccgtc
accttcaccaacaaggcggcccgcgagatgaaggaacgtatcggcgttctcgtcggcggc
gccgtcgaaggcatgccctggctcggcaccttccactcgatcggcgtaaaaatcctgcgc
cgccatgccgaactggtcggcctgcgctccgatttcaccattctcgacaccgatgacgtc
gtccgcctcatcaagcagctgatccaggccgagggcctcgacgacaagcgctggccggca
aagcagttcgccggcatgatcgacggctggaagaacaagggcctgctgccgcacgacatc
ccggaaggcgatgcccgcgccttcgccaacggcaagggccgtgaactctacgccgcctat
caggcgcgcctgcgcacgctcaacgcctgcgatttcggcgatcttctgctgcatccgatc
gcgatcttccgcaagacgccggatctgttgaaggaatatcaccagaaattccgctacatc
ctggtcgacgagtatcaggataccaacaccgctcagtatatgtggctgcgcctcctcgcc
cagcgcccaaagggcgtgccgcagaatgtctgctgcgtcggcgacgacgaccagtcgatc
tatggctggcgtggtgcggaagtcgataacatcctccgcttcgagaaggatttccccggc
gccaaggtgatcaagctggagcgcaactaccgctccaccgaacacatcctcggcgccgcc
ggccacctgatcgcccataacgaaggccggctcggcaagacgctgttcaccgaccgggtc
gaccccgacgacgagaaagtcatcgtccacgccgcctgggactcggaagaggaagcccgc
gccgtcggcgaggagatcgagcgcctgcagcgcggcgataataccaatggggatggcaag
aagcacgcgctgaacgatatggcgatcctcgtccgcgcctccttccagatgcgcgaattc
gaagaccgcttcgtcacgctcggcctgaattaccgcgtcatcggcggcccgcgattctac
gaacggctcgagatccgcgatgccatggcctatttccgcctcgtctgccagccggccgac
gatctggccttcgagcggatcatcaacacgccgaagcgcggccttggcgatacgaccgtg
cgctacctgcatgattacgcccgcgcccgcgatatcccgatgttgcaggcggccgccgat
atcatcgagacggacgagctgaagccgaaagcccgcaaggcgctgttcgacgtgattcaa
agtttcaggaactggcaggaacggcttgaaaacaccgaacataccgaacttgccgaacag
atcctcgaagagtcgggctataccgacatgtggaagaacgacaagtcggcagaggcaccg
ggccgcctcgataacctgaaggaactgatccgctcgatggaagccttcgaatcgatgcgc
ggcttcctcgaacatgtctcgctggtcatggatgccgagcagaacgagaacatggatgcc
gtctcgatcatgacgctgcattcggccaagggactggaattcgataccgtcttcttgccc
ggctgggaggaaggcctgttcccgcaccagcgcgcgctggacgaggggggccgctccggc
ctcgaggaggaacgccgcctcgcctatgtcggcatcacccgcgccaagcgccgctgccac
atctggttcgtctccaaccgccgcatccacggcctgtggcaatcgaccatgccctcacgc
ttcctcgacgaactgccgccgagccatgtcgatgtcgcagcctcggacagttccaacagc
tatggcggctatggcggacgcggaggctacggccagtcgcgcttcgacaaggcagatccc
ttcgccaactcctattcgacccccggctggaagcgcgcccaggccaacaagaccgaagcc
acccgcgacaactggggctcccgctccggccacgcggtggaacggatcggctatggtgaa
tcaggcccgcgcggccgcacgatcgacggcgaactggtggcaaaatccgtggctgagacc
ccgtcgaaatttttagtcggcgaccgcgtcttccacatcaagttcggcaacggcaacata
tccgccatcgaaggcaacaagctgacgatcgaattcgaccgcgccgggcagaagcgcgtg
ctggatgggtttgtggagaaggcggggtga
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