Neorhizobium sp. NCHU2750: NCHU2750_30390
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Entry
NCHU2750_30390 CDS
T05650
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nen
Neorhizobium sp. NCHU2750
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nen03032
]
NCHU2750_30390 (topA)
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_30390 (topA)
Enzymes [BR:
nen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCHU2750_30390 (topA)
DNA replication proteins [BR:
nen03032
]
Prokaryotic type
DNA Topoisomerases
NCHU2750_30390 (topA)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCHU2750_30390 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
YhdP
Motif
Other DBs
NCBI-ProteinID:
AYD02424
LinkDB
All DBs
Position
complement(3124397..3125467)
Genome browser
AA seq
356 aa
AA seq
DB search
MDLSLKTIEIDVASLEAIGLTYVSDTEPGIRRLRRGKGFSYKLPDGLVLSDDRDRMRIAA
LGLPPAYENVWICLDPRGHLQATGYDARGRKQYRYHADWQSFRSEQKFDQLARFGAALPK
IRRKVKHDLSLGLDQSDCVLAALVALMDATYLRVGNRAYAKENRTYGATTLLKRHMVLSG
DGVLLKFTAKGGKRVQHTLKHPRLQRILEEIADLPGRQLFSFPDEHGTPRPVDSGRLNAY
LAKAAGFPISAKTFRTWGGSLAAFVTAWTIVEQEGKRPKIKALTKAASEVLQNTPAVCRS
SYVHPAILDLSENVAPLEAMMNDATLVKPPRGLRLNEARLVEFLKMDASPLASFSP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacctttctctcaaaacgatcgagatcgatgtcgcctcgcttgaggcgatcgggctt
acctatgtcagcgatacggagccgggcatccggcgcctgcggcgagggaaggggttctcc
tacaaattaccggacgggctcgttctctccgatgacagggacaggatgcggattgccgca
ctcggcctgccgccggcctatgagaatgtctggatctgcctcgatccgcgcgggcatctg
caggcgacgggctatgatgcgcgcgggcgcaagcaatatcgctaccatgccgattggcag
agctttcgcagcgagcagaaattcgaccagctggcgcgtttcggcgcggctttgccgaag
atccgccgtaaggtgaagcacgatctgtcgctcgggctcgaccagtcggattgcgtgctt
gccgctctcgtggcgctgatggatgccacctatctgagggtcggcaaccgcgcctatgcc
aaggagaaccgcacctatggggcgacgacgcttctcaagcggcacatggtcctctccggc
gatggcgtgctgttgaaattcaccgccaagggcggcaagcgcgtgcagcacacgctcaaa
catccgcggctgcagcgcattctggaagagatcgccgatcttcccggccggcagctcttt
tcgtttcccgacgaacacggcacgccgcggccggtcgattccggtcggctcaatgcctat
ctcgccaaggctgccgggtttccgatctcggccaagacgttccgcacctggggcggtagc
cttgccgccttcgtcacggcctggacgatcgtggaacaggagggcaagcggccgaagatc
aaggcactgaccaaggcggcgtcggaggtgttgcagaacacgccggcagtgtgccggtcg
agctatgtgcatccggccattctcgacctctccgagaacgtggcgccgctggaggcgatg
atgaacgatgcgaccttggtgaagccgccgcgcgggttgcggttgaatgaggcacggctg
gtggaatttttgaagatggatgcttcaccgcttgcgtccttctccccgtga
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