Neorhizobium sp. NCHU2750: NCHU2750_33260
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Entry
NCHU2750_33260 CDS
T05650
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCHU2750_33260 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_33260 (alkA)
Enzymes [BR:
nen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NCHU2750_33260 (alkA)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCHU2750_33260 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AYD02711
LinkDB
All DBs
Position
complement(3463105..3463752)
Genome browser
AA seq
215 aa
AA seq
DB search
MVLTIIRSDADVEAGLAQLLIIDPRLVPVAEIAGPLPLRLAEPGFRGLASIIVSQMVSRA
SADAIWRRIEASGPVTAERYAALDPQVIATFGLSRAKASTLKGLADTVNSGGIELEGICL
LDADEAMRRLVALPGIGPWTAEVYLMFCGGHPDIFPAGDVALRAAVGRGLLLEARPDIRQ
VAGIAAAWAPYRSVAARLFWAHYAATMRREALPVA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtggttttgacaatcatccgaagcgacgccgatgtcgaggccggccttgcgcaactgctc
atcatcgatccgcggctcgtgccggtggcggagattgccgggccgctgccgctgaggctg
gcggagccggggttccgtgggcttgcctcgatcatcgtgtcgcagatggtgtcgcgcgcc
agtgcggatgcgatctggcggcggatcgaggcatcggggccggtgacggcggagcgctat
gcggcgctcgacccacaagtgatcgccacattcggtctgtcacgggcgaaggcttcgacg
ctcaagggcctcgccgacaccgtcaacagcggcggcatcgagctagagggtatctgtctg
cttgacgcggatgaggcgatgcgtcggctcgtggcgcttcccggtatcgggccatggacg
gcagaagtctatctgatgttctgcggcgggcatccggatatctttcctgccggcgatgtg
gcgctgagggcggctgttggccgggggcttctcctggaagcgcggccggatatccgccag
gtggccgggatcgctgcggcatgggccccctaccgctccgtcgcggcccggcttttctgg
gcgcattatgccgcgacgatgcgtcgcgaggcgctgcccgtggcctga
DBGET
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