Neorhizobium sp. NCHU2750: NCHU2750_34850
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Entry
NCHU2750_34850 CDS
T05650
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen00300
Lysine biosynthesis
nen00470
D-Amino acid metabolism
nen01100
Metabolic pathways
nen01110
Biosynthesis of secondary metabolites
nen01120
Microbial metabolism in diverse environments
nen01230
Biosynthesis of amino acids
Module
nen_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCHU2750_34850 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCHU2750_34850 (dapF)
Enzymes [BR:
nen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCHU2750_34850 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AYD02870
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All DBs
Position
complement(3624651..3625553)
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AA seq
300 aa
AA seq
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MAGQVEFARMNGLGNKILVVDMRGRSDKVTPEAAIALNADPATQFDQIMAIHDPKAQGTD
AWIDILNCDGTKAQACGNGTRCVVQALAAETGRKTFTFQTVAGILNAQEHEDGTISVDMG
KPVFQWDKIPLSEEFFDTSRIELQIGPIDAPILHSPSAMSMGNPHAVFWVDKDPMTFDLE
RFGPMLENHPMFPEKANITLAQVTSDSSLRTRTWERGAGLTLACGSAACAAGVSAARTGR
TGRRVTIDVASAPTRQPLVIEWRENDHVVMTGPAEWEWSGQVDPLTGVFSRDAEPEAQAN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacaggtcgaatttgcgcggatgaacgggcttggcaacaagatcctcgtcgtc
gacatgcgcggccgcagcgacaaggtgaccccggaggcagcgattgcgctgaatgccgat
cctgccacccagttcgaccagatcatggcgatccatgacccgaaggcccagggcaccgat
gcctggatcgatatcctcaactgcgatggcacaaaggcgcaggcctgcggcaacggcacg
cgctgcgtggtgcaggcgcttgccgcggaaaccggacgcaagaccttcacattccagacc
gtcgccggcattctgaatgctcaggagcatgaagacggcacgatttccgtcgacatggga
aagccggtcttccaatgggacaagatcccgctttcggaggaattcttcgatacgagccgg
atcgagctgcagatcggcccgatcgatgcgccgatcctgcattcgccctcggccatgtcg
atgggcaatccgcatgcggtcttctgggtcgacaaggaccctatgaccttcgatctcgaa
cgtttcgggccgatgctggaaaatcacccgatgtttccggaaaaggcgaatatcacgctg
gcgcaggtcacgtccgacagttccctgcgcacccgcacctgggaacgtggtgccggcctg
acgcttgcctgcggttctgccgcctgtgctgccggtgtttctgccgcccgcaccggtcgc
accggccgcagggtgacgatcgatgttgcgtcggcgccgacgcgccagccgctcgtcatc
gaatggcgcgaaaacgaccatgtcgtcatgaccggccctgccgaatgggaatggtcgggc
caggtcgatccgctgactggtgttttctcgcgcgatgcagagccggaggctcaggcaaat
tga
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