Neorhizobium sp. NCHU2750: NCHU2750_38290
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Entry
NCHU2750_38290 CDS
T05650
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nen
Neorhizobium sp. NCHU2750
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nen03016
]
NCHU2750_38290 (truB)
Enzymes [BR:
nen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCHU2750_38290 (truB)
Transfer RNA biogenesis [BR:
nen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCHU2750_38290 (truB)
Prokaryotic type
NCHU2750_38290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AYD03214
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All DBs
Position
4029508..4030437
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AA seq
309 aa
AA seq
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MSKPRKPKGRAVSGWLILDKPVDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERSTDDLEGEVTASSDARPAEQAIRDLLPAYTGVI
QQIPPQFSAIKIAGERAYDLARDGETVEIPSREVEIFRLTLLGTGENEAHFEVECGKGTY
VRSLARDFGRELGCYGHISNLRRTFVAPFAEDKMVPLADLVALETIEDRDERLAALDAML
IDTAEALSSLPHLPVTEEQAHRIKMGNPIILRGRAAPVEEPEAYATVRGKLIAIGEIGQG
EFRPKRVFG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaagggccgggcggtttccggctggctgatcctcgacaag
ccggtggatttcggctcgaccgaagccgtgtccaagatcaagtggctgttcaacgcccag
aaggcgggccatgccggcacgctcgatccgctggcatcgggcatgctgccgatcgcgctt
ggcgatgcgacgaagaccgtcccctatgtcatggatggccgcaagatctacgaattcacc
gtcacctggggcgaggagcgctcgaccgacgatctcgaaggcgaggtgacggcctcttcc
gacgcgaggcccgccgaacaggcgatccgcgatctcttgcctgcctataccggcgtcatc
cagcagatcccgccgcagttttcggccatcaagatcgccggcgaacgcgcctatgatctc
gcccgcgatggcgagacggtcgagatcccgtcccgtgaagtggaaatcttccgcctgacg
ctgctcggtaccggcgaaaacgaggcgcatttcgaagtcgaatgcggcaagggcacctat
gtgcgctcgctcgcccgcgatttcggccgagaactgggctgctacggccatatctcgaac
ctgcgccgcactttcgtcgcgccgttcgccgaagacaagatggtgccgcttgctgatctc
gtcgcgcttgagacgatcgaggatcgtgacgagcgtctggcagcgctcgacgccatgctg
atcgatacggccgaggcgctctcctcgctgccgcatttgccggtgaccgaagagcaggcg
catcgcatcaagatgggcaacccgatcatccttcgcggccgcgccgctcccgtcgaggag
ccggaagcctatgcgacggtccgcggcaagctgatcgccatcggcgaaatcggccagggc
gaattccgtcccaagcgagtattcgggtaa
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