Neorhizobium sp. NCHU2750: NCHU2750_39120
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Entry
NCHU2750_39120 CDS
T05650
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03030
DNA replication
nen03410
Base excision repair
nen03420
Nucleotide excision repair
nen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCHU2750_39120 (polA)
03410 Base excision repair
NCHU2750_39120 (polA)
03420 Nucleotide excision repair
NCHU2750_39120 (polA)
03440 Homologous recombination
NCHU2750_39120 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nen03032
]
NCHU2750_39120 (polA)
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_39120 (polA)
Enzymes [BR:
nen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCHU2750_39120 (polA)
DNA replication proteins [BR:
nen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCHU2750_39120 (polA)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCHU2750_39120 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCHU2750_39120 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
WHD_BrxR
HHH
NYN_YacP
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AYD03297
LinkDB
All DBs
Position
4115889..4118906
Genome browser
AA seq
1005 aa
AA seq
DB search
MDADPAPRYSMPMKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKL
LTDARDTSVGVTPTHLAVIFDYSSKTFRKDLYDAYKANRSAPPEELVPQFGLIRQATRAF
NLPCIETEGFEADDIIATYARQAEAAGADVTIVSSDKDLMQLVTPTVHMYDSMKDKQIGI
PDVIEKWGVPPEKMIDLQAMVGDSVDNVPGIPGIGPKTAGQLLEEFGDLDTLLARAGEIK
QVKRRENIIANADLARLSRQLVELRTDVPLELDLDALFLEPQDGPKLVAFLKAMEFGTLT
RRVASACDCDANAIEPAVIETEWGADAHGPDLDVAAPAKADEAAADKAPAMAKPVAASGA
DGATPQSLAAGRAEAFAAATIDTTKYVAIRDLATLEEWIAAARETGLVAFDTETTSLDPM
QAELVGFSLAIADNSRNPSGLDIRAAYVPLTHKTGVGDLLGGGMAENQIPVRDALDRLKP
LLEDPSVLKVAQNLKYDYLVMKRHGITVKGYDDTMLMSYVLEAGKSGGHGMDALSERWLN
HKPIAFKDVAGSGKSGVTFDFVDIDRATAYAAEDADVTLRLWMVLKPQLAAIGLTRIYER
LERPMVDVLARMEERGISIDRQILSRLSGELAQKAAAFEDEIYELAGEKFTIGSPKQLGD
ILFGKMGLPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPGY
VHPETKRVHTSYSLASTTTGRLSSSEPNLQNIPVRNAEGRKIRTAFIATPGNKLLSADYS
QIELRVLAHVADIPQLRQAFEDGIDIHAMTASEMFGVPVEGMPGEIRRRAKAINFGIIYG
ISAFGLANQLSIERSEASDYIKKYFERFPGIRDYMETTKAFAREHGYVETIFGRRAHYPE
IKSSNPSMRAFNERAAINAPIQGSAADIIRRAMVKMEPALAEAGLSARMLLQVHDELIFE
VEDAEVERAMPVIVSTMEQAAMPAISMKVPLKVDARAASNWDEAH
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatcctgcgccacgctattccatgcccatgaaaaaaggcgatcacctcttc
ctagtcgacggttccggtttcatctttcgcgcgtttcacgcgctgccgccgctgacccga
aaatccgatggcctgccggtcggcgcggtctccggcttctgcaacatgttgtggaagctc
ctgaccgacgccagagacacctccgtcggcgtcacgcccacccatctggccgtgattttc
gactactcgtctaagaccttccgcaaggatctctatgacgcctacaaggcgaaccgctcc
gcgccgccggaagaactcgtcccgcaattcggcctcatccgccaggcgacccgcgccttc
aacctgccctgcatcgagaccgagggtttcgaggccgatgacatcatcgccacctacgcc
cgccaggcggaagctgccggcgccgatgtcacgatcgtgtcatccgacaaggacctgatg
cagctcgtgacgccgacggtccacatgtatgacagcatgaaggacaagcagatcggcatt
cccgatgtcatcgagaaatggggcgtgccgccggaaaagatgatcgacctgcaggccatg
gtcggcgattcggtcgataacgtgccgggcatccctggcatcggtccgaagaccgccggc
cagctgctggaggaattcggcgatctggacacgctgctcgcccgcgccggcgagatcaag
caggtcaagcgccgcgaaaacatcatcgccaatgccgatctcgcccgcctgtcccgccag
ctggtggaattgaggaccgacgtgccgttggaactcgatcttgacgccttgttcctagag
ccgcaggacggcccgaaactcgtcgccttcctgaaggctatggaattcggcaccctgaca
cgccgcgtcgcctctgcctgcgattgcgatgccaatgccatcgagcccgccgtcatcgag
accgaatggggtgcggacgcacatggccccgatctcgacgtggccgctccggccaaagcc
gatgaggctgcggctgacaaggcgcctgcgatggccaagcctgttgcagcgtctggcgcc
gacggtgccacaccgcagtcgctggccgcaggccgtgcggaagccttcgccgctgccacg
atcgacaccacgaaatacgtcgcgatccgcgatctcgccacgcttgaagagtggattgcc
gccgcccgcgaaaccggcctcgtcgccttcgacaccgaaaccacctcgcttgatccgatg
caggcggaactcgttggcttctcgctcgcgatagccgataacagcaggaacccgtccggc
ctcgatatccgtgccgcctatgtgccgctcacccacaagaccggcgtcggcgatctcttg
ggcggcggaatggcggaaaaccagatcccggtccgcgacgcgctggaccgcttgaagccg
ctgctcgaagatccttcggtgttgaaggtcgcgcagaacctcaaatacgactatctcgtc
atgaagcgccacggcattaccgtgaagggctatgacgacacgatgctgatgtcctatgtg
ctggaagccggcaagtcaggtggtcacggcatggacgcgctgtcggaacgctggctgaac
cacaagccgatcgccttcaaggatgtcgccggttccggcaagagcggcgtgactttcgat
ttcgtcgatatcgaccgcgccaccgcctatgcggccgaggatgccgatgtgacgctgcgc
ctgtggatggtgctcaagcctcaactggcagccatcggcctgacccgcatctacgagcgg
ctggaacgcccgatggtcgacgttctggcccgcatggaagagcgcggcatctcgatcgat
cgccagatcctgtcgcgcctttccggcgaactggcgcagaaagcggctgccttcgaagac
gagatctatgaactggccggcgagaaattcaccatcggctcgccgaagcagctcggcgat
atcctgttcggcaagatgggccttcccggcggttccaagaccaagaccggccaatggtcc
acttcggcgcaagtgcttgaagacctcgcggccgaaggtgccgaactgccgcgcaagatc
gtcgactggcgccagctgaccaagctcaaatccacctataccgacgcactgccgggctat
gttcaccccgaaacgaagcgggttcacacatcctattcgctggcctcgacgacgaccggc
cgcctgtcctcgtccgaacccaacctgcagaacattccggtccgcaacgccgagggccgt
aagatccgcacggccttcattgccacgccgggcaacaagcttctgtcggcggattacagc
cagatcgaactgcgcgtgctcgcccatgtggcagacatcccgcaacttcgccaggccttc
gaggacggcatcgacattcatgcgatgaccgcgtcggaaatgttcggcgtgccggtcgaa
ggcatgccgggcgagatccgccgccgcgccaaggcgatcaacttcggcatcatctatggc
atttcggccttcggccttgccaaccagctgtcgatcgagcgatccgaggcaagcgactac
atcaagaagtatttcgagcgctttccgggcatccgcgattacatggagacgaccaaggcg
ttcgcccgcgaacacggttatgtcgagacgatcttcggccgccgcgcgcattatccggaa
atcaagtcctccaacccatcgatgcgcgccttcaacgaacgtgccgcgataaacgcaccg
atccagggctcggcagccgatatcatccgccgcgccatggtgaagatggagcccgcactg
gcagaggcgggcctgtctgcccgcatgcttttgcaggtccatgacgaactgatcttcgaa
gtcgaggatgccgaggtcgaacgcgccatgcccgtcatcgtctcgaccatggagcaggcg
gccatgccggccatatcgatgaaggtgccgctcaaggtggatgcgcgtgctgcatccaac
tgggatgaagcacactga
DBGET
integrated database retrieval system
