Neorhizobium sp. NCHU2750: NCHU2750_40450
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Entry
NCHU2750_40450 CDS
T05650
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCHU2750_40450 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_40450 (xseA)
Enzymes [BR:
nen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCHU2750_40450 (xseA)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCHU2750_40450 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AYD03430
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All DBs
Position
4251092..4252726
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AA seq
544 aa
AA seq
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MSSTFASDAPGNAQSNLTEFSVSELSGSIKRTVENTFDHVRVKGEISGYRGPHSSGHAYF
SLKDDRARIDAVVWKGTFSRLRFRPEEGMEVIATGKVTTFPGSSKYQIVIENLEPAGAGA
LMALLEERRRKLAAEGLFDQNRKRPLPYLPRVIGVVTSPTGAVIRDILHRITDRFPVHVV
VWPVKVQGEGSGEEVAAAIRGFNAVGPGSPMPRPDVLIVARGGGSLEDLWSFNDEIVVRA
AAESDIPLISAVGHETDWTLIDHAADVRAPTPTGAAEMAVPVKADLDAQLSNLSARLRAS
ASRQMDHRRQALRALMRALPSLDQLLALPRRRFDEAAMGLGRGLERTTIEKRRSFERVSA
GLRLELLTSRMQQQRQALSDRLLRADRCVERLLLGEKGRIARLDASLKALPARLSGQLQR
EHQNLAALMRQADTAISHALSRSRAAVASQDRVLQSLSYKNVLQRGYAVVRDAGERPLTR
AAGVLPGNLLSIEFADGRIAAISGEEGEPPESGPAVVSPTPAPQKRKAAKPEDTSGAPKQ
GSLF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacgttcgccagcgacgcccccggcaatgcccagagcaatctgaccgaattt
tcggtgtcggaactttccggctcgatcaagcgcaccgtcgaaaacactttcgaccacgtc
cgggtaaagggcgagatttccggctatagaggccctcattcctccggtcacgcctatttc
agcctgaaagacgatcgcgcccgcatcgatgcggtggtctggaaaggcaccttctcgcgc
ctgcggttccggcccgaagagggcatggaagtcatcgccaccggtaaggtgacgaccttc
ccgggatcgtccaaataccagatcgtcatcgagaacttggagccggcaggtgccggcgcg
ctgatggcgctgctcgaagaacggcggcgcaagcttgctgccgaaggcctgttcgaccag
aaccgcaagcggccgcttccctatctgccccgcgttatcggcgtggtgacctcgcccacc
ggcgccgtcatccgcgatatccttcatcgcattaccgatcgcttcccggtccatgttgtg
gtctggccggtcaaggtgcagggcgagggatcgggtgaggaagtcgctgccgcgatacgc
ggcttcaatgccgtcggccccggaagcccgatgccgcgcccggatgtcctgattgtggcg
cgtggcggcggcagcctcgaggatctgtggagcttcaatgacgagatcgtcgtcagggcc
gcagccgagagcgatattccgctgatctccgcggtcggccacgagaccgactggacgctg
atcgatcacgccgcggatgtgcgtgcgccgacgccgacaggcgccgccgaaatggccgtg
ccggtcaaggcggatctcgacgcccagctttccaatctgtctgcccgcctgcgcgccagc
gcctcgcgccagatggatcatcgccgccaggcgctgagggcgctgatgcgcgcactccct
tcgctcgaccagttgctggcacttccccgccgtcgcttcgacgaggcggccatggggctc
ggccgcgggctcgagcggacgacgatcgaaaagcgccgcagcttcgagcgggtttccgcc
ggtctccggcttgagcttctgaccagccgcatgcagcagcagcgccaggcactgtccgat
cgcctcttgcgcgccgatcgctgcgtcgagcggttgctgctcggagagaagggcaggatc
gcccgcctcgatgcatcgctgaaggcattgccggcgcgcctgtccggccagctccagcgg
gagcaccagaacctcgctgcattgatgcgccaggccgatacggcgatcagccatgccctg
tcgcgcagccgtgccgccgtggcgagccaggaccgtgtcctgcagtcgctttcctacaag
aacgtgcttcagcgcggttatgcggtcgtcagggatgcgggggaacgcccgctcacgcgc
gctgccggcgtgctgccgggcaatctcctgtcgatcgaatttgccgacgggcggattgct
gcaatatcgggagaggaaggcgagccgccggaaagtgggccggcggtggtgtctccgaca
cctgccccgcaaaagcgcaaggccgcaaagccggaagacacatccggggctccgaaacag
ggcagcctgttttag
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