Neorhizobium sp. NCHU2750: NCHU2750_58920
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Entry
NCHU2750_58920 CDS
T05650
Symbol
ku
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NCHU2750_58920 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_58920 (ku)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NCHU2750_58920 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AYD05257
LinkDB
All DBs
Position
pNCHU2750d:complement(146948..147757)
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AA seq
269 aa
AA seq
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MAIRPYWKGYLKLSLVTCPVEMMPATSESEKVRFHTINEKTGNRVMSQYVDSVTGKPVRD
DKQGKGYARGENEYVVLSEDEIDAVALDTVKTIDISRFVPADSIPWIYLEKPHYLAPGDK
VGDEAFSVIREAMKASDVVGISKLVVGRRERAVVLEPRDNGIVLWTLRFGDEVRPEAEYF
EDIDDEADDEALPLLRKLIKQKTKTWSPTMVSDPIQDALLALIDEKKGSLKPARKTKAKK
GEAAPSNVVNIMDVLRKSLEQDQRKKKAS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccgtccatattggaaaggctacctcaaattgtcgctcgtcacttgtcccgtc
gagatgatgccggccacttcggaatccgagaaggtcaggttccacaccatcaacgagaag
accggcaaccgggtcatgtcccaatacgtggactccgtcacggggaagccggtccgtgac
gacaagcagggcaaaggatacgcacgcggcgagaacgaatacgtggtcctgagcgaggac
gagatcgacgccgtcgcgctcgacaccgtcaagacgatcgacatctcccgcttcgtgccg
gccgacagcatcccatggatctaccttgagaagccgcactacctggcgcccggcgacaaa
gtcggtgacgaggcgttcagcgtcatccgggaggcgatgaaggcgtctgatgtcgtcggc
atctccaagctggtcgtcggccgtcgcgaacgcgccgtggtcctcgagccacgggacaac
gggatcgtgctctggaccctgcggttcggcgacgaggttcggcccgaggcagagtacttc
gaggacatcgacgacgaagcggacgacgaagccctgcccttattgcggaagctcatcaag
cagaagacgaagacctggtcgccgacgatggtcagcgatccgattcaggatgcgctgctg
gcgctcatcgacgagaagaaggggtcgctgaagcctgcaaggaagacgaaggcgaagaaa
ggcgaggccgctccgtccaacgtcgtgaacatcatggacgtgcttaggaagagcctcgaa
caggaccagagaaagaagaaggcgagctga
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