Neorhizobium sp. NCHU2750: NCHU2750_59340
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Entry
NCHU2750_59340 CDS
T05650
Symbol
traR
Name
(GenBank) transcriptional regulator TraR
KO
K19732
LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCHU2750_59340 (traR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nen03000
]
NCHU2750_59340 (traR)
Transcription factors [BR:
nen03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NCHU2750_59340 (traR)
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GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Xre-like-HTH
HTH_28
MerR
Motif
Other DBs
NCBI-ProteinID:
AYD05299
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Position
pNCHU2750d:complement(188633..189280)
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AA seq
215 aa
AA seq
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MIENVLQTFSKSWGYEHFAYLQTEGSEVKTINSYALGWQERYLKKEYAKLDPVVEEAKRR
REMFSWSADDWVDRRGTDLRKFRDEAIGCGIRSGVTMAIEGSYCSTIMLTFASGKKKEET
LPLFKPIEGLRVILAVHYRLEHVGARKAIAPKQTLSAREKMCVKWAIKGKSSSDMAALTG
LNIRTIQHYLDNAREKLDAKTLAQLVGLLKDRGWC
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaatgttctacagaccttcagcaagtcatggggctacgaacatttcgcctat
cttcaaaccgaaggatccgaggtcaagaccatcaactcatatgcgctgggttggcaggag
agatatctcaagaaggaatacgcgaaactcgatcccgtcgtggaggaggccaaacgccgg
cgcgaaatgttttcatggagcgcggacgactgggttgatcggcgtggcactgatctccgc
aaattccgtgatgaagccatcggctgcgggattcgttcgggtgtgacaatggcaattgaa
ggcagctattgctcaaccatcatgctgacgtttgcctctggaaagaaaaaagaggagacc
ctaccgctcttcaagcccatcgaaggactgcgcgtcattcttgctgtgcattatcggctg
gaacatgtcggcgccagaaaggcgatcgcgccgaagcagaccttgtccgcgcgcgagaag
atgtgcgtcaaatgggcgatcaaagggaaatcgtcttcagatatggcagctctgacgggc
ctgaatatcagaacgatccagcattacctggacaacgcccgcgaaaaactcgacgccaaa
accctggcgcaactggtcggcctgcttaaggataggggttggtgctga
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