Neorhizobium sp. SOG26: CYG48_03980
Help
Entry
CYG48_03980 CDS
T05626
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
neo
Neorhizobium sp. SOG26
Brite
KEGG Orthology (KO) [BR:
neo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
neo03016
]
CYG48_03980 (rnd)
Enzymes [BR:
neo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CYG48_03980 (rnd)
Transfer RNA biogenesis [BR:
neo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CYG48_03980 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXV14926
UniProt:
A0A346YKC9
LinkDB
All DBs
Position
complement(803021..804181)
Genome browser
AA seq
386 aa
AA seq
DB search
MIETTAALEEACTKLAKSDFITIDTEFLRETTFWPQLCLIQMASPDLEVLIDPLAKGLDL
KPFFELMGNPSVTKVFHAARQDIEIIYHLGNLVPHPIFDTQVAAMVCGFGDSVSYDQLVS
RTKNVHIDKSSRFTDWSRRPLSEKQLEYALADVTHLRDVYLYLKAELEREGRALWLTEEM
AVLESPNTYDLHPDDAWLRLKSRLRKPTELAVVKFVAAWREREARNRNVPRSRVLKDDAI
YEIAQQQPKDTEAMSRLRTIPKGWERSASGAAIIEAVNAALALPKSEMPHAPKHVHVPEG
TAAAVELLKVLLKLISDREGVAAKIIANTDDLEKIAAEGENAEVAALNGWRRDLFGNTAL
KLINGGVALRFVNKKVEAVDLETAGD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacgaccgccgctctcgaagaagcctgcactaagcttgcaaaatccgacttc
atcaccatcgatactgagttcctgagagaaacgaccttctggccgcagctctgcctgatc
cagatggcaagtcctgatctggaagtgctgatcgatccgctggcaaaagggctggatctc
aagcctttcttcgagctgatgggcaatccttccgtcaccaaggtcttccatgcggcgcgg
caggatatcgagatcatctatcatctcggcaatctcgtgccgcacccgatcttcgacacc
caggttgccgcaatggtctgcggcttcggcgactccgtctcctatgaccagctcgtcagc
cgcacgaagaacgtccatatcgacaagtcgtcccgctttaccgactggagccgccgcccg
ctgtctgaaaagcagctggaatatgcgctggctgacgtcacccatcttcgcgacgtttat
ctttacctcaaggccgaactggagcgcgaaggccgcgcactttggctgaccgaagaaatg
gcggtgctggaatctcccaacacctacgacctccaccctgacgacgcctggctgcggcta
aagtcccggctgcgcaagccgaccgaacttgcggtggtgaagttcgtggccgcatggcgt
gaacgggaagcgcgcaaccgcaacgtaccacgctcgcgcgtgctgaaagacgatgcgatt
tacgagatcgcccagcagcagcccaaggacactgaagccatgtcacgcctgcgcacgatc
ccgaagggttgggaacgctctgcctcgggcgctgcgatcatcgaagcggtcaatgccgcg
ctcgcccttccgaaatcggaaatgccgcatgcgcccaagcacgtgcatgtgccggaagga
acggcagccgcagtcgaactgctgaaagtcctgctgaagctgatttccgaccgcgaaggg
gtggctgccaagattatcgccaataccgatgatctcgagaagatcgcagccgaaggcgag
aatgccgaggtcgcagccttgaacggctggcgtcgtgacctgttcggcaatacggcgctg
aagctcatcaatggcggtgttgcactgcgcttcgtcaacaagaaggtggaagccgtcgat
ctcgaaaccgccggcgactaa
DBGET
integrated database retrieval system
