Neorhizobium sp. SOG26: CYG48_04625
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Entry
CYG48_04625 CDS
T05626
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
neo
Neorhizobium sp. SOG26
Brite
KEGG Orthology (KO) [BR:
neo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
neo03032
]
CYG48_04625 (topA)
03400 DNA repair and recombination proteins [BR:
neo03400
]
CYG48_04625 (topA)
Enzymes [BR:
neo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CYG48_04625 (topA)
DNA replication proteins [BR:
neo03032
]
Prokaryotic type
DNA Topoisomerases
CYG48_04625 (topA)
DNA repair and recombination proteins [BR:
neo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYG48_04625 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AXV15043
UniProt:
A0A346YKP6
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Position
complement(943849..946503)
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AA seq
884 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMSWEVDASSQK
RMKDIADAVKGSDGLFLATDPDREGEAISWHVLDLLKKKRVLGDKPVKRVVFNAITKKAV
LDAMANPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ENEIERFVSEEYWNLSALLRTPRGDEFEAKLVSADGKRLQNRGIKNGEDANRLKALLDGA
VYTVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFNASRTMQVAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIEGARHAIVDQFGQRYLPEKARFYSTKAKNAQEAHEAIRPTDFNR
SPDKVRQYLDHDQQRLYDLIWKRGIASQMASAEIERTMVEILADNNGQKAGLRAVGSVVR
FDGFLGAYMDQREEGEKGEDDDEDGRLPPINAREKLDKRKVDAGQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLKTLSDREYVTAEKRKLVPQAKGRLVTAFLESFFTKYVEYDFT
ADLEEKLDKISAGELDWKQVLREFWQDFFGQIEDTKELRVTNVLDALNEALAPLVFPKRE
DGSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNYTRQLSSEGGADAEAAGLNEPKAL
GADPHTGEEITLRSGRFGPYVQRGEGKEAKRSSLPKGWKPEDIDHEKALALISLPRDVGK
HPESGKMISAGIGRYGPFLLHDGTYANLESVEDVFSIGLNRAVTVLAEKQSKGPGGRTRG
TPAALKELGDHPDGGALTVRDGRYGPYVNWGKINATLPKGMDPQSVTMEQAMALIVEKGG
KAAPAKAKAKKTATKAAADTKKTKAPAKKAPAKKTATKAKKTDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtcgtcgtagaatctccggccaaagccaagaccatcaacaagtatcttggc
tcgggctacaaggttctcgcatctttcggtcacgtgcgtgacctgcccgccaaggatggc
tccgtgcttcccgaccaggatttcgaaatgtcctgggaggtcgatgcctcctcgcaaaag
cgcatgaaggatatcgcggacgccgtgaaaggttccgatggcctcttcctcgcaaccgac
ccggatcgcgaaggggaagccatttcctggcacgttctcgacctcctgaagaagaaacgc
gtccttggtgacaagccggtgaagcgcgttgtcttcaacgccatcaccaagaaggccgtg
ctcgatgccatggccaatccgcgcgatatcgacgtgccgctggtcgacgcctatcttgcg
cgccgcgccctagattatctcgtcggtttcaatctctcgccggttctctggcgcaagctg
cccggcgcccggtcggctggccgcgttcagtcggttgccctgaggctcgtctgcgatcgc
gaaaacgagatcgagcggttcgtttcggaagaatactggaacctgtccgcattgctgcgc
accccgcgcggcgacgagttcgaagcgaaactcgtgtctgccgacggcaagcgcctgcag
aaccgcggcatcaagaatggcgaagacgcaaaccgcctgaaggcgctgctcgatggcgcc
gtctataccgtggatacggtcgaggcaaagccggtaaagcgcaatccgggaccgccattc
accacctccacgctgcagcaggcggcatcgtccaaccttggcttcaacgcctcgcgcacc
atgcaggtggcgcagaagctttatgaaggcgtcgacatcggcggcgagacggtcggcctc
atcacctatatgcgtaccgatggggtgcagatggcgcccgaagcgatcgaaggtgcgcgc
cacgcgatcgtcgaccagttcggccagcgctacctgccggaaaaggctcgtttctattcg
accaaggcaaagaacgcccaggaagcgcacgaagcgatccgcccgaccgacttcaaccgc
tcgcccgacaaggtgcgccagtatctcgatcacgaccagcagcgtctttacgacctgatc
tggaagcgcggcatcgccagccagatggcgtccgccgagattgagcgcacgatggttgag
atccttgccgacaacaacggccagaaggctggcctgcgcgccgtcggctccgtcgtccgt
ttcgacggcttccttggcgcctacatggaccagcgcgaagaaggcgaaaagggcgaggat
gacgacgaggacggtcgcctgccgccgatcaatgcgcgcgaaaagctcgacaagcgcaag
gtggatgcaggccagcatttcaccgagccgccgccgcgttattcggaagcatcgctgatc
aagaagatggaagagctcggcatcggccgcccttccacctatgcggcaacgctgaagacg
ctgtccgaccgtgaatatgtcacggcggagaagcgcaagctcgtgccacaggccaagggc
cgcctcgtcaccgccttcctcgaaagcttcttcacgaagtatgtcgaatacgatttcacg
gccgatcttgaagaaaagctcgacaagatctcggctggcgaactcgactggaagcaggtc
ctccgggagttctggcaggacttcttcggccagatcgaagacaccaaggaactgcgcgtt
accaacgtgctcgacgccctgaatgaggcgctcgccccgcttgtcttccccaagcgcgaa
gacggcagcgacccgcgcatctgccaggtctgcggcaccggcaacctgtcgctgaagctc
ggcaagtatggtgccttcgtcggctgctcgaactatccggaatgcaactacacccgccag
ctttcctccgagggcggtgcggatgcggaagccgccggactgaacgagccgaaggcgctt
ggtgccgatccgcataccggtgaagaaatcacgctgcgttcgggtcgtttcgggccgtat
gttcagcgcggggaaggcaaggaagccaagcgctcctcgctgccaaagggctggaagccg
gaagacatcgaccacgaaaaggcgctcgcgctcatcagcctgccgcgcgacgtcggcaag
cacccggaatcgggcaagatgatctcggccggcatcggccgttatggcccgttcctgctc
cacgatggcacctatgccaacctcgaaagcgtcgaggacgtgttctcgatcggcctgaac
cgggcggtgaccgtgcttgctgaaaagcagagcaagggcccgggcggccgcacccgcggc
acgccagcggcgctcaaggaactgggagaccatccggatggcggcgcactcaccgttcgc
gacggccgttatggtccttatgtgaactggggcaagatcaacgccaccctgccgaagggc
atggatccgcaatcggtgaccatggaacaagccatggcacttattgttgaaaagggcggc
aaggccgcgcctgccaaggcaaaggccaagaagacggcgaccaaggctgcggcagacacg
aagaagacaaaggctcccgctaaaaaggcgccagccaagaagaccgctacgaaggcgaag
aagacggacacgtga
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