Neorhizobium sp. SOG26: CYG48_08295
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Entry
CYG48_08295 CDS
T05626
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
neo
Neorhizobium sp. SOG26
Pathway
neo03420
Nucleotide excision repair
neo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
neo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYG48_08295
03430 Mismatch repair
CYG48_08295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neo03400
]
CYG48_08295
Enzymes [BR:
neo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYG48_08295
DNA repair and recombination proteins [BR:
neo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYG48_08295
MMR (mismatch excision repair)
Other MMR factors
CYG48_08295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3638
Motif
Other DBs
NCBI-ProteinID:
AXV15694
UniProt:
A0A346YMJ7
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All DBs
Position
1657970..1660480
Genome browser
AA seq
836 aa
AA seq
DB search
MTNSFDDIPFFGDEDEPAARKPQAPGERPQAAAGGLGIAARAMAARGGQREAPDYLSGLN
PEQREAVETTDGPVLVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMK
ERIGMLVGGAVEGMPWLGTFHSIGVKLLRRHAELAGLRSNFTILDTDDVVRLIKQLIQAE
GLDDKRWPAKQFAGMIDTWKNKGLLPADIPEGDARAFANGKGRELYAAYQARLRTLNACD
FGDLLLHPIAIFRKTPDLLKEYHQRFRYILVDEYQDTNTAQYMWLRLLAQRPQGVPQNVC
CVGDDDQSIYGWRGAEVDNILRFEKDFHGAKVIKLERNYRSTEHILGTAGHLIAHNEGRL
GKTLFTDRVNPDDEKVMVHAAWDSEEEARAIGEEIERLQRGDGIPGSEGKKHALNDMAIL
VRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNT
PKRGLGDTTIRYLHDYARARDIPMLQAAADIVETDELKPKPRKALFDVVQSFRNWSQRLE
STPHLDLAEQILEESGYTDMWKADKSAEAPGRLENLKELIRSMEAFESMRGFLEHVSLVM
DAEQNENLDAVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYV
GITRAKRRCHIWFVSNRRIHGLWQSTMPSRFLDELPQAHVDVAASETNYGGYGGRGGYGQ
SRFDKADPFANSYSTPGWKRAQANKTDATRDNWGSRSGHSIERIGYGESGPRGRTIDGEL
VAKSVADVPSQFSVGDRVFHIKFGNGNISAIEGNKLTIDFDRAGQKRVLEGFVERA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgactaacagtttcgacgacattccgttcttcggtgacgaagacgaaccggcagcgcgc
aagccgcaagcgccgggagaacggcctcaggctgccgcaggcggtttgggtatcgctgcc
cgcgccatggccgcacgcggtggccaacgcgaggcgcccgattatctttcgggccttaat
ccggagcaacgggaagccgttgaaacgacggatggccccgtgctcgtgctcgcaggcgcc
ggcaccggcaagacgcgcgtgctcaccacccgcatcgcccacatccttgcaaccgggaaa
gccttcccgagccagatcctggcggtgaccttcaccaacaaggctgcccgcgagatgaag
gagcgcatcggcatgctggtcggtggtgccgtggaaggcatgccgtggcttggcaccttc
cactcgatcggcgtcaagctattgcgccgccacgcggaattggcagggctgcgctccaac
ttcaccattctcgacaccgatgacgtggtgcggctgatcaagcaattgatccaggcggaa
gggctcgatgacaagcgctggccggccaagcagttcgccggcatgatcgacacctggaag
aacaagggcctgttgcctgccgacattcctgagggtgacgctcgcgccttcgccaatggc
aaaggtcgcgaactttacgccgcctaccaggcgcgccttcgcaccttgaatgcctgcgat
ttcggcgacctgctgctccacccgatcgcgatcttccgcaagacgccggacctcctgaag
gaatatcaccagcggttccgatacatcctcgtcgacgagtaccaggacaccaacacggcg
caatacatgtggctgcggcttctggcgcaacgaccgcagggcgtgccgcagaacgtctgc
tgcgtgggtgacgacgaccagtcgatctatggctggcgcggcgcggaagtggataatatc
ctgcgcttcgaaaaggatttccacggcgccaaggttatcaagctggagcgcaactaccgc
tcgaccgaacatatcctcggcacggccggccacctgattgcccataacgaaggccggctc
ggcaagacgcttttcacggatcgggtaaaccctgatgacgaaaaggtgatggtgcacgcg
gcctgggactcggaagaagaggcccgtgcaatcggcgaagagatcgagcggctgcagcgt
ggcgacggcattccgggaagcgagggcaagaagcatgcgttgaacgacatggcgatcctg
gtgcgcgcctccttccagatgcgcgagttcgaagaccgcttcgtcacacttggcctcaac
taccgcgtcatcggcggtccgcgcttctatgagcggctcgagatccgcgacgccatggcc
tatttccgcctggtctgccagcccgccgacgacctcgccttcgagcgcatcgtcaacacg
ccaaagcgtgggctgggcgataccacgatccgttacctccatgactacgcccgtgcccgt
gacatcccgatgctgcaggccgctgccgatatcgtcgagaccgacgagttgaagcccaag
ccacgcaaggcgctgttcgatgtcgtgcaaagcttcaggaactggagtcaacggcttgaa
tcgactccgcatctcgacctggcggaacagatcctggaagaaagcggctataccgacatg
tggaaggccgacaaatcggcagaagcaccgggccggctggaaaacctgaaggaactcatc
cgctcgatggaagcattcgagagcatgcgcggcttcctggagcacgtgtcgcttgtcatg
gacgccgagcagaacgaaaacctcgacgccgtctcgatcatgacgctgcattccgccaag
gggctggaattcgacaccgtcttcctgcccggttgggaggaaggcctcttcccgcaccag
cgggcgctcgatgaaggcggacgttccgggctcgaagaagaacgccgcctcgcctatgtc
ggcatcacccgcgccaagcgccgctgccatatctggtttgtgtccaaccggcgcatccat
ggcctctggcagtcgaccatgccgtcacgtttcttggatgagttgccgcaggcgcacgtg
gatgtcgcagcctccgaaaccaactacggcggatacggcggtcgcggcggttatggccag
tcgcgcttcgacaaggcagatcccttcgccaacagttattcgacgcccggctggaaacgc
gcccaggccaacaaaaccgacgcgacccgcgacaactggggcagccgctccggccattcg
atcgagcggatcggttacggcgaaagcggacctcgtggccgcaccatcgacggcgaactg
gtcgcaaaatcggtggcggacgtgccgtcgcagttctccgtcggcgaccgggtcttccac
atcaagttcggcaacggcaatatctcggccatcgaaggcaacaagctgacgatcgatttc
gaccgcgccggacaaaagcgggtgctggagggatttgtggagcgggcatag
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