Neorhizobium sp. SOG26: CYG48_11940
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Entry
CYG48_11940 CDS
T05626
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
neo
Neorhizobium sp. SOG26
Brite
KEGG Orthology (KO) [BR:
neo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
neo03032
]
CYG48_11940
03400 DNA repair and recombination proteins [BR:
neo03400
]
CYG48_11940
Enzymes [BR:
neo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CYG48_11940
DNA replication proteins [BR:
neo03032
]
Prokaryotic type
DNA Topoisomerases
CYG48_11940
DNA repair and recombination proteins [BR:
neo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYG48_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
AXV16351
UniProt:
A0A346YPF4
LinkDB
All DBs
Position
complement(2408891..2409985)
Genome browser
AA seq
364 aa
AA seq
DB search
MDALITPLDTDQESLEIIGLSYVSDTEPGIRRLRRGKGFCYKLPDGKLVTDEEERRRIAA
LGLPPAYENVWICLNPRGHLQATGYDARGRKQYRYHVDWQNLRSERKFDQLMRFGESLPR
IRNKAKRDLASGLDKSEAVLAAIVSLMDATHLRVGNKAYAKENKTYGATTLLKRHMMLSG
DAIVLRFTAKGGKKVRHTLKHPRLQRILEEIADLPGRQLFSWPDENGVPHPVDSGRLNAY
IAKAAGFAVSAKTFRTWGGSLAALMAAWDHVAQQGTAPKVKLMTHAASEALHNTPAVCRS
SYIHPAILALADDVTPLQTVMAARPVVNGPKGLRANERRLLAFLQEATVSPEQEKAAGVE
TQAA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcattacacccctcgacaccgaccaggaatcgcttgagatcatcggtctc
agttatgtcagcgacacggagcccggcatccgccgcctgcgccgcggcaagggattttgc
tacaagctgccggatggaaagctcgtgacggatgaggaggagcggcggcgcattgcagcg
ctcggcctgccgccagcctacgagaatgtctggatctgcctcaacccgcgcggccatctg
caggcgaccggttacgatgcacgcggccgcaagcagtaccgctaccatgttgattggcag
aacctgcgcagcgagcgcaagttcgatcagctcatgcggttcggtgagtccctgccacgc
atccgcaacaaggcgaagcgggaccttgcctcaggattggacaagtcggaggccgtgctg
gcggcgatcgtgtcgctgatggacgcgacgcatctgcgcgtcggcaacaaggcctatgcc
aaggaaaacaagacctatggcgcgaccacgcttctgaagcgccacatgatgctgtcgggt
gacgcgatcgtgctgcgctttaccgccaagggcggcaagaaggtgcgccacacgctcaag
catccgcgcctgcagcgcatcctggaagagattgccgacctgccgggccggcagctgttc
tcctggccggatgaaaacggcgtgccgcatccggtcgatagcgggcggctcaacgcctac
atcgccaaggccgcggggtttgccgtgtctgccaagaccttccgcacctggggcggcagt
cttgccgcactgatggccgcctgggatcacgtggcgcagcagggtacggcgccgaaggtg
aagctcatgacccatgcggcatccgaggcgctccacaacacgccggccgtctgccgttcg
agctatatccacccggcaatccttgccctggcggatgatgtcacaccgctccagacggtg
atggcggcacggccggtggtgaacgggcccaagggccttcgcgccaacgaacgacggctc
cttgcatttctgcaggaagccacggtttcgccggaacaagaaaaggccgccggcgtcgaa
acgcaggcggcctga
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