Neorhizobium sp. SOG26: CYG48_16565
Help
Entry
CYG48_16565 CDS
T05626
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
neo
Neorhizobium sp. SOG26
Pathway
neo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
neo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYG48_16565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neo03400
]
CYG48_16565
Enzymes [BR:
neo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CYG48_16565
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CYG48_16565
DNA repair and recombination proteins [BR:
neo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CYG48_16565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AXV17162
UniProt:
A0A346YRR5
LinkDB
All DBs
Position
3370652..3371530
Genome browser
AA seq
292 aa
AA seq
DB search
MPELPEVETVRRGLAPAMENAVIAKLELNRPDLRFPLPENFASAVEGRRIVSLGRRAKYL
LIELEDDLTIISHLGMSGSFRIADETLGDFHYPRSKDGKHDHVVFHLVREGAPLRVIYND
PRRFGFMHLWKRSELDLYPAFAGLGPEPTGNALDATYLAARFAGKAQPLKGALLDQTVIA
GLGNIYVCEALWRSHLSPRRAAGSLVTPTGRPKKELLLLTDAIRDVIADAIAAGGSSLRD
HIQTDGSLGYFQHSFSVYDQEGKPCRTPGCGGTVARITQAGRSTFFCPRCQK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccagaggtcgaaaccgtccggcgcggcctcgctccagccatggagaac
gcggtgatcgcaaagctggagctcaatcggccggacctgcgttttccgctgcccgagaat
ttcgcctctgctgtcgagggacggcggatcgtttcgctcggtcggcgcgccaaatatctg
ctgatcgagctcgaggacgacctgacaatcatcagccatctcggcatgtccggctccttc
cgcatcgctgacgaaacgttgggcgacttccattacccgcgttccaaggatggcaagcat
gaccatgtcgtgtttcacctggtgcgggagggggcgccgctgcgggtgatctacaatgat
ccgcgccgtttcggcttcatgcatctgtggaagcgttccgaacttgatctttatcctgcc
tttgcggggctcggaccggagccgaccgggaatgcgctggacgccacctatctcgccgcc
cggtttgccggcaaggcgcagccgctcaagggcgcgctgcttgaccagacggtgattgcc
gggcttggcaatatctatgtctgcgaggcgctctggcgttcgcacctgtcgccgaggcgt
gccgctggcagtctcgtcaccccgaccggcaggccgaaaaaggaactgctgctgctgaca
gatgccatccgcgacgtgatcgccgatgcaatcgccgccggcggctcgtccttgcgcgac
catatccagacggacggatcgctcggttatttccagcattccttctccgtctacgaccag
gaaggcaagccttgccgcacgcccggatgtggcggtacggtcgcccgcatcacccaggcg
ggccgttcgacattcttttgcccccgctgccagaaatag
DBGET
integrated database retrieval system
