Nanoarchaeum equitans: NEQ248
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Entry
NEQ248 CDS
T00152
Name
(GenBank) NEQ248
KO
K11600
exosome complex component RRP41
Organism
neq
Nanoarchaeum equitans
Pathway
neq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
neq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEQ248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
neq03019
]
NEQ248
Messenger RNA biogenesis [BR:
neq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NEQ248
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
NEQ248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
30K_MP_C_Ter
Motif
Other DBs
NCBI-ProteinID:
AAR39101
UniProt:
Q74NF6
LinkDB
All DBs
Position
219770..220471
Genome browser
AA seq
233 aa
AA seq
DB search
MRFDGRDYNEIRDTEMKIGVISKADGSAYCRTGNTIAIAAVYLKPGREQSNLKVSYRMLP
FAGEERKGLGLTRREIELSYIIAKALEPAIIFEEIPYLTIEASVEIIKADAGTRVAAINA
LSLALAHAGIPMKALVGAIAVGKVGEKIVLDLNKQEEDYDSEIIKKELPQYYEYYGEGKA
VDIPMAMYKNKITLLQLDGSIDRKSLLEAIKLGKDGIKRMIDLQKIAIEDYYF
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgatgggagagactataatgaaataagagatactgaaatgaaaataggagta
atctctaaagcggatggtagcgcatattgtaggactggcaatactattgctatcgcagca
gtatatttaaaacctggtagagaacaatccaatttaaaagtaagctataggatgcttcct
ttcgctggagaagaaaggaaaggcctaggtttaacaagaagagaaatagaacttagctat
ataatagctaaagctttagagccagcaattatatttgaagaaataccctatttaacaatc
gaagcttctgtagaaataattaaagctgatgccggaacaagagtagcagcgataaatgct
ttgtccttagctttagcccatgcaggaattcctatgaaagctttggttggagccatagca
gtaggaaaggttggagaaaaaatagtattagatttgaacaaacaagaagaagactatgat
tctgaaataataaaaaaggaattgccccaatattacgaatactatggagaaggaaaagct
gtcgatatacctatggcaatgtataagaacaaaattacattattgcaattggatggttct
atagatagaaaatccttattagaagcaatcaaattaggcaaggatggtataaagagaatg
attgatttacaaaaaatagctatagaggattattatttttaa
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