Nanoarchaeum equitans: NEQ293
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Entry
NEQ293 CDS
T00152
Name
(GenBank) NEQ293
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
neq
Nanoarchaeum equitans
Brite
KEGG Orthology (KO) [BR:
neq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
neq03016
]
NEQ293
Enzymes [BR:
neq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NEQ293
Transfer RNA biogenesis [BR:
neq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEQ293
Prokaryotic type
NEQ293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
UPF0181
UFL1
Motif
Other DBs
NCBI-ProteinID:
AAR39141
UniProt:
P60348
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All DBs
Position
complement(265757..266881)
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AA seq
374 aa
AA seq
DB search
MRIKEKPEDFVVIEKTNFSIAEPSKYYDQFKFMGIKDNGIPGDYTIYVLKKKNLSTTQAI
KIIAKQFRLSKYRISFSGEKDKKAITYQLISIYKGPKKSMFLDNLELYYIGLSDKPVKLG
SHLGNYFEIKVYAESPKGFDVFPNYFDVQRFGDKRLVNHLIGKHLIKNECEEAAKILLTF
VGKESKKTIKVRQLIKEYWNNIEKLKKVIPLMPKALDIEKAYLQSFIEKKDYCKAFKAIP
KWILMLFIHSYQSYIFNETLKMYLKNKTKIIKIRDLLEFYFADYYENIEIPLIGYKVNAK
GEIKEIIDYLLDKEGITIEMLKNKKVVGTYRKGFQKMYDLKIKKNQKWLTKFYLEKGSYA
TVAIRSLFLEPIDF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattaaggaaaagcctgaggattttgttgttattgaaaaaactaatttttctata
gcggaaccatcgaaatattatgatcaattcaaatttatgggaataaaagataatggaatt
cctggggattatactatttatgttttgaaaaagaaaaatttatcaacaactcaagcaata
aagataatagcaaaacaatttcgtttgtctaaatatagaatatccttttctggggaaaag
gacaaaaaagctataacttatcaattgatttctatatataaagggcccaaaaaatctatg
tttttagataatttagaattatactatatagggcttagcgataaaccagtaaaattgggt
tcccatttagggaattattttgaaataaaagtttatgcagaatccccaaaggggtttgat
gtttttccaaactattttgatgtccaaagatttggagacaaaagattagtaaaccatcta
ataggcaaacatttaataaaaaacgaatgcgaggaagctgctaaaattttattaacattt
gttggaaaagaaagtaaaaaaacaataaaagttaggcaattaataaaagaatattggaat
aatatagaaaagctaaagaaagttattccattaatgccaaaagccctagatatagaaaaa
gcctatttgcaatcctttattgagaaaaaagactattgtaaagcgttcaaagctatccca
aaatggattttaatgttatttatacattcgtaccaatcttatatatttaatgaaaccctt
aagatgtatctaaaaaacaaaacaaaaataatcaaaataagagatttattggaattctat
tttgcagactattatgaaaacatagagattccattaattgggtataaagttaatgccaaa
ggcgaaataaaagaaataatagattatttattagataaagaaggcattactattgagatg
ctaaaaaataaaaaagttgttggcacttatagaaagggctttcaaaagatgtatgatttg
aaaataaagaaaaaccaaaaatggttaactaaattctatctagaaaagggttcctacgcc
acagtagcgattaggtctttatttttagagcccatcgatttttaa
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