Nanoarchaeum equitans: NEQ466
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Entry
NEQ466 CDS
T00152
Name
(GenBank) NEQ466
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
neq
Nanoarchaeum equitans
Pathway
neq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
neq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEQ466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
neq03019
]
NEQ466
Messenger RNA biogenesis [BR:
neq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NEQ466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
PDEase_II
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AAR39309
UniProt:
Q74M96
LinkDB
All DBs
Position
413981..415315
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AA seq
444 aa
AA seq
DB search
MKIEVRAVGGYNEIGANMTAIGIDDEWLIIDMGVHVDKMLAFQKDQEEVVEWNRELLEKI
NALPKIEYIEDIKDKVKAILITHGHLDHIGAVIHLAYEFNAPIIGPPYAIELIRSFEKDY
KIILPNEMKKINLNSSIQISDKISVDFIYATHSIPHSAHLAIHTPKGVIFFSGDYKFDNF
PVIGQRYNLEKLKEIAKEGVILAFIESTRADEDKRSYSEIIAREMLRDVLFEEHEGLIIM
TTFSSHIARLKSMVELSLELDRDVYILGRSMVKNVEIAEKLGIYKFSDKAKIYQYHDQIA
RLLKKIDDRSKYALIVTGNQGEPGSVLWRMAFEKFPFRLDKKDTVIFSCFTIPNAINIAF
RNLIEEKIKSFGTRIIKDVHVSGHAMRDDHYRLIKILKPQIIIPNHGDFIKRGALADLAM
NEFGYSLGKDLFLIQNGQRINFEF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaagtaagagctgtagggggttataacgaaataggcgctaatatgacagct
attggaatagatgacgaatggctaataatagatatgggtgtgcatgtcgataaaatgtta
gcatttcaaaaagaccaagaagaagttgtagaatggaatagggaattattagaaaaaata
aacgctttaccaaaaatagagtatatagaggatataaaagataaagttaaggcaatacta
attacgcatggccatttagaccatataggagcagtaatacatttggcttatgaatttaat
gctccaattatcggcccaccctatgccatagaattaataagatctttcgaaaaggattat
aaaataatattgccaaacgaaatgaaaaagataaaccttaattcctctatacaaattagc
gataaaataagtgtagatttcatttacgcaacccattccataccgcatagcgcccatttg
gctatacatactccaaaaggagtaatattcttctcgggagattataaattcgacaatttc
ccagtaatagggcaaaggtataatttagaaaaactgaaagagatagctaaagaaggggta
atattagcatttattgaatccactagggcagacgaagataaaagaagctatagcgagata
attgctagggaaatgcttagagatgttttattcgaagagcatgaagggttaataataatg
actactttttctagccacatagcgagattaaaatccatggttgaactaagcttagaattg
gatagagatgtgtatatattaggaagaagtatggtaaaaaatgttgaaatcgctgaaaaa
cttggaatatacaagtttagcgataaggctaaaatatatcaataccatgaccaaatcgct
aggctattaaaaaagattgatgatagatctaaatatgcactaattgttacaggcaaccaa
ggagagcccggtagcgttctatggaggatggcttttgagaaattcccatttaggttagac
aaaaaagatactgttatatttagttgctttacaataccaaatgctataaatattgctttt
agaaacctaatagaggaaaaaataaaatcttttggtactagaataataaaagatgtccat
gtctctggccatgcaatgagggacgaccattatagactaataaagatactaaagccccaa
ataataatcccaaaccatggagattttataaaaagaggagcattagcagatttggcgatg
aacgaatttggttattctttagggaaagatttatttttaatacaaaatgggcaaagaata
aattttgagttctaa
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