Nanoarchaeum equitans: NEQ540
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Entry
NEQ540 CDS
T00152
Name
(GenBank) NEQ540
KO
K15172
transcription elongation factor SPT5
Organism
neq
Nanoarchaeum equitans
Brite
KEGG Orthology (KO) [BR:
neq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NEQ540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
neq03021
]
NEQ540
03019 Messenger RNA biogenesis [BR:
neq03019
]
NEQ540
Transcription machinery [BR:
neq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NEQ540
RNA polymerase I system
NEQ540
Messenger RNA biogenesis [BR:
neq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NEQ540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW2_Spt5
KOW4_SPT5
Ribosomal_uL24m-like
KOW5_SPT5
NusG
DUF4925
Imm48
DUF3195
Motif
Other DBs
NCBI-ProteinID:
AAR39381
UniProt:
Q74M56
LinkDB
All DBs
Position
477562..478089
Genome browser
AA seq
175 aa
AA seq
DB search
MLSNKYLKDFIFNNQMIWIVKTAGGKEEIVADLIEAKAKKLGANVYSIVIAPGIKGYIFV
EADKYDTVNELVHDIKHVRKVLPKPIEVKDIEKFIKAEPLVTKVNVGDIVEVIAGPLKGS
RGKVVAFNENTGEVTIETLDSVIPLPVTVSIHDIKLVEPSKEEKKEEVEEFLFFE
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
ttgctatctaataaatatttaaaagattttatttttaacaaccaaatgatatggatagtt
aaaactgctggaggaaaagaagaaatagttgcagatttaatagaggcaaaagctaaaaag
ctgggtgcgaatgtatattctatagttattgccccaggaattaaaggttatatttttgtg
gaggcagacaaatatgatactgtaaatgaattagtccacgatataaaacatgttagaaaa
gttttgcctaaacccatagaagttaaagacatagaaaaattcataaaagcagagccattg
gtaacaaaagtaaatgttggcgacatcgtagaagtaatagctggcccattgaagggctct
agagggaaggtagtagcattcaatgaaaatacaggagaggtaacaatagaaacattagat
tcggtaatacctttgcctgttacagtatctattcatgatataaaattagttgagcccagc
aaagaagagaagaaagaagaagtcgaagagtttttgtttttcgaatag
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