Nereida sp. NH-UV-3: NeNHUV3_03960
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Entry
NeNHUV3_03960 CDS
T11315
Symbol
bamA_1
Name
(GenBank) Outer membrane protein assembly factor BamA
Organism
ner Nereida sp. NH-UV-3
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Paralog
GFIT
Motif
Pfam:
POTRA
Omp85
Motif
Other DBs
NCBI-ProteinID:
XHY13143
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Position
complement(409384..411717)
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AA seq
777 aa
AA seq
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MGLLLGVCRAGTGTMKRAGLAAVTAGFMSGAVYAQSFTFDNVEIEGNARVEAATILSFAG
ISRGETISAGQLNDAFQRVLSSGLFEDVVLTPRGSTLVIEVAEFPTINQINVEGNRRLKD
EVVQSLIASQPRRVYSPSVAEQDAELIAQAYAEQGRLAATVKPSIIRRSDNRVDLVFEVT
EGRVVEVERLSFTGNRAYSDRRLRRVLQTKQAGIFRQVVSRDTFIEDRVNFDRQVLSDFY
ASRGYVDFNIQGVSSELTRERDAFLITFDVEEGQQFRLGEVNVVSLLDDVDTAEFEDALK
VGRSPVYSPNLIDINIARLERRALELGLNFVRADPRVTRNDRDLTLDVTFELTRGDRIFV
ERIDIEGNSTTLDRVIRRQFKVVEGDPFNPREIRNSAERIRALGYFGNAGVQAREGSSPN
QVVIDVDVEEQPTGSLSFGASFGTANGFGLTAELRERNFLGRGQSVSLGFNTTDGSESLS
FSFNEPAFLDRELGFGLSGSYGTTDSDFAAYNTESARLSPSINFPVSENGRLSLRYSLGF
EEVLDVSDGSDARLESSDLLQQDQAKGRETVSSVGYTYSFDSRTTGLNPDAGVIFRFSQD
FAGVGGDKEYLRSTFFAGATTKVLSDEVTLRAVFEGGALNSLNDTTSAVTDRFGSSGRLR
GFEPGGFGPRDRNAPANDALGGNYYAVMRLEADFPIGLPEEYGISGGVYLDAGSVWGLDD
DLSGAIDDSFSLRSAIGVSIFWNTAIGPLRFNFSKPLEFEKNFDKTETFDLSVSTSF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcttttgggtgtatgtcgtgccggaacaggtacgatgaaacgagcgggccta
gcggcagtgactgccggctttatgtctggcgctgtttacgcgcagtcttttacatttgat
aacgtcgaaattgaagggaacgcccgcgttgaggcggctaccatcctgtcgtttgctggc
attagccgcggcgagacgatcagtgcaggccagctaaacgatgcatttcaacgtgtgcta
agttcgggcctgtttgaggacgtagttctgacgccacgcggcagcacgcttgtgattgaa
gttgctgaattccccacaattaaccagatcaatgttgaaggtaaccgccgcctgaaagat
gaggttgtccaaagcttaatcgcctcgcaaccgcgccgcgtttacagtccgagtgtggcc
gaacaggatgccgaactaatcgcgcaagcctacgcggagcaggggcgtttggccgcaact
gttaagccaagcatcatccgccgttctgacaaccgcgtcgatcttgtgttcgaagtaact
gaaggccgcgttgtagaagttgagcgcttgtcgtttacgggcaaccgcgcttattcggac
cgccgtttgcgccgtgtcctgcagaccaaacaagcgggtatcttccgccaagtcgtcagc
cgcgacacgtttattgaagaccgcgtgaattttgaccgccaagtcctaagcgacttttac
gcctctcgcggttatgtggatttcaatatccaaggggtctcatccgagctgacccgtgaa
cgcgacgcgttcctgatcacatttgatgtcgaagaaggccagcagttccgccttggagag
gtcaacgttgtaagccttttggatgatgtggataccgcagaattcgaagatgcgctgaaa
gtcgggcgctcaccagtctattccccgaacctgatcgacatcaacattgcccgccttgag
cgccgcgcgcttgagttgggcttgaactttgtgcgcgccgatccgcgggtgacgcgcaac
gatcgcgacctgacccttgatgtgacgtttgaattgacacgcggtgatcgcattttcgtt
gagcgcattgatattgaaggcaattcgacaacgcttgatcgggttattcgccgtcaattc
aaagtcgttgaaggcgatccattcaatccccgtgaaatccgcaattcagccgagcgtatc
cgcgctttgggttatttcggcaatgctggcgtgcaggcgcgcgagggctccagccccaac
caagttgtgattgacgttgatgtggaagaacaacccaccggcagtctgtcgttcggggcg
agttttggcactgcaaacggttttggcctgacagctgagctgcgtgagcgtaacttcttg
ggccgtgggcagtcagtttcgcttggtttcaacaccaccgatggcagtgaatccctcagc
tttagtttcaacgagcctgcgtttctggaccgtgagttgggctttggtctgtcaggcagc
tatggcaccacggacagtgatttcgccgcctacaacaccgaaagcgcacgtctgtcccca
tccatcaacttccctgtgagcgaaaacggccggttgagcctgcggtattcactggggttc
gaggaggtgcttgatgtaagcgacggctctgacgcgcgcttggaatcgtcggaccttttg
caacaagatcaagccaagggacgtgagacagtcagctcagttggttatacctacagcttc
gactcgcgcaccacgggtcttaatcctgacgcaggtgtgatcttccgcttctcgcaagac
ttcgcaggcgttggcggtgacaaagagtatttgcgcagcacattctttgcaggggcgacc
accaaagtcctgagcgacgaagtcacgcttcgtgcagtatttgaaggtggtgcgctgaac
tcgctgaacgacaccacaagcgctgtgacagatcgttttggatcaagtggccgtctgcgc
gggttcgagcccggtggctttggtccccgcgatcgtaacgcgcctgccaatgatgcgctt
ggcggtaactactacgcagtgatgcgacttgaggctgatttcccaatcggattgccggaa
gagtatggcatttcaggcggggtttatctggatgcgggctcggtttggggtttggatgat
gatctgagcggtgcgattgatgacagcttctcacttcgttctgctatcggtgtttcaatt
ttctggaataccgcgattggcccgcttcggtttaacttctcaaaaccgctcgagtttgaa
aagaacttcgacaaaacggaaacctttgatctttccgtttcgacaagcttttga
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