Nereida sp. NH-UV-3: NeNHUV3_11440
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Entry
NeNHUV3_11440 CDS
T11315
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ner Nereida sp. NH-UV-3
Pathway
ner03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ner00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NeNHUV3_11440 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ner03400
]
NeNHUV3_11440 (uvrB)
DNA repair and recombination proteins [BR:
ner03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NeNHUV3_11440 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NeNHUV3_11440 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
UB2H
AAA
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
XHY13875
LinkDB
All DBs
Position
1138476..1140689
Genome browser
AA seq
737 aa
AA seq
DB search
MSYAHSDSQPPRPTAPVLANPAPDVKTRDKLEGGISFKLNTEFEPAGDQPTAIKELSTGV
LNGDRDQVLLGATGTGKTFTMAKVIEQTGRPAIILAPNKTLAAQLYGEFKGFFPDNAVEY
FVSYYDYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGI
GSVETYGAMTQDIHVGKMYDQRQVIADLVAQQYKRNDAAFQRGTFRVRGDSLEVFPAHLD
DRAWRLSFFGEELETITEFDPLTGEKTDTFDKIRIYANSHYVTPKPTMQQAITGIKKELR
VRLDQLVADGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEF
IPDNAIVFADESHVSVPQIGGMYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQ
SVFVSATPAAWEIEQAGGVFTEQVIRPTGLLDPVIEIRPVETQVDDLLDEIRRVAADGMR
VLATTLTKRMAEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLRE
GLDIPECGLVAILDADKEGFLRSETSLVQTIGRAARNAEGRVIMYADKVTGSMERAMGET
ERRRTKQIAYNEEHGITPETVKKNVEDVLAGLYKGDVDMNRVTATIEKPMAGDNLAAHLD
GLREDMRKAAENLEFEEAARLRDEVKRLETVDLVVSDDPLARQAVVEKAVDDAQKASGRS
TAGRAGQRGGTKRSKRR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgcccattcagatagccagccaccacgcccgacagcgcccgttttggcaaat
cccgcgccagacgtgaaaacccgtgacaagctggagggcggcatttcgttcaagctcaac
accgagtttgaacccgcgggcgaccaacccacggccatcaaagaactgtcgactggtgtg
ctgaacggcgaccgcgatcaggtgctgcttggcgcaacaggcaccggcaaaacattcact
atggcaaaagtgattgagcaaacgggacgccccgcgatcatccttgcgcctaacaaaacg
ctggccgcccaactttatggggagttcaaaggctttttccccgataacgcagtcgagtat
ttcgtcagctattatgactactatcaaccggaagcctatgtagcgcgctctgatacttac
atcgaaaaagagagccagattaacgagcaaattgaccgtatgcgccactctgcaacccgt
gcgcttttggaacgtgatgacgttattatcgtggcgtccgtgtcgtgtatttacggcatc
ggttcggtcgaaacttatggggccatgacccaagatatccacgtgggcaaaatgtacgat
cagcgtcaggtcatcgccgatctggtcgcccaacaatacaaacgtaacgacgcggcgttt
cagcgtggcacgtttcgcgtgcgcggagatagccttgaagtcttccctgcccaccttgat
gatcgtgcgtggcggctgtctttcttcggcgaagaattggaaaccattactgaattcgac
cccctgactggtgagaaaacagacacgttcgacaaaatccgcatctacgccaacagtcac
tacgtcaccccaaaacctacgatgcaacaagcgattacgggcatcaaaaaggaactgcgg
gttcggcttgatcagttggtggcagatggcaaattgcttgaagcgcagcgccttgaacag
cgcacgaatttcgatcttgagatgctggaagccactggggtttgcaacgggatcgagaac
tattcacgctatctgacaggccgcgcaccgggcgagccgccccccacactgtttgaattc
atcccagacaacgccattgttttcgctgacgagtcccatgtctctgtgccgcaaatcggc
ggcatgtacaaaggtgacttcagacgcaaaatgacgctggccgagcacggcttccgcctt
ccgtcttgcatggacaaccgccccctcaaatttgaggaatgggatgcgatgcggccccag
tctgtctttgtgtcagctactccagccgcttgggaaatcgaacaagcaggcggcgtattc
acagaacaagtcatccgccccacaggccttttggaccccgtcatcgaaattcgccccgtt
gagacacaggtggatgaccttttggatgaaatccgccgcgttgcagcggatggcatgcgg
gtgctggccacgacattgaccaagcgcatggccgaggacctgacggagtatctgcacgaa
caagggattcgcgtacgctacatgcactcagacatcgatacgattgaacggattgagatt
ttgcgcgacctgcgccttggggcatttgatgtactggtggggatcaacctgctgcgtgag
ggtctcgacattcccgaatgtgggcttgtggcaattcttgatgcggacaaagagggcttt
ttgcgctcggagacgtcattggtgcagaccatcggccgcgcggcgcgaaacgccgaaggc
cgcgtgatcatgtacgcggataaagttaccggcagcatggagcgcgccatgggcgaaacc
gaacgccgccgcaccaagcaaattgcgtataatgaagaacacggcatcacacctgaaaca
gtgaagaaaaacgtcgaagacgtgctggccggtctctacaaaggcgacgtggatatgaac
cgcgtgacagcgaccatcgaaaaaccgatggccggtgataatcttgcggcacatcttgat
gggctgcgcgaagacatgcgcaaagccgccgaaaaccttgagtttgaagaagccgcccgc
ctgcgtgacgaggtgaagcgtcttgagactgtagatttggtggtgtccgacgatcctctg
gcccgccaagcagttgttgagaaagcagttgatgatgcgcaaaaagcatcgggccgctca
accgcaggacgtgccgggcaacggggcggaacaaagcgcagcaaacggcgctag
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