Nereida sp. NH-UV-3: NeNHUV3_11790
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Entry
NeNHUV3_11790 CDS
T11315
Symbol
dbpA_1
Name
(GenBank) ATP-dependent RNA helicase DbpA
Organism
ner Nereida sp. NH-UV-3
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Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Asn_synthase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XHY13909
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Position
complement(1176239..1178254)
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AA seq
671 aa
AA seq
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MKKTIADALAAKGYDKLTPVQEAVSDPALTGADMLVSAQTGSGKTVGFGLAIAPTLLGDG
DGFERASTPLALIIAPTRELAMQVKRELAWLYGPAGAVMASCVGGMDMRDERRALDRGAH
IVVATPGRLRDHIMRGSIDLSQTRAVVLDEADEMLDLGFREDLEFILGEAPDERQTLLFS
ATVPKAIANLAKSYQKDAVRVSTKAETSQHADIEYHAMAVSPRDGENAIINVLRYYEAPN
AIVFCNTRAMVNRITTRLSNRGFSVVALSGELSQNERTHALQAMRDGRARVCVATDVAAR
GIDLPNLDLVVHAELPGSHETMLHRSGRTGRAGRKGVSALIVTPKVRKKAERILGMAKVQ
AVWGQAPSADAVNARDDERMLADPAWSEAIAEGEMEAVSGLAAQFTPEQLAAAYLRLYKA
NRSAPEELGAADAAPKPREEFGASTWFSVAGGRKDGAEPRRLLPMLCKAGGLDKDDIGAI
RIQQDESYVQIRDESVERFLAEIGSDMNVEGAKLTKLDRAPNLGASGPRGGGAPRGGKPA
YKGSKPKGDWHPAGPKGEGKGAARREDAPRKPRTKKPRSDEQAAAPYRAPRENLTETHEG
AVKPRSPKGAGKPSGKPGGKPSGKPYGKSGPKGPPPPKGKSNSKKNQARNAAAKAEGGPR
KPRTKSNGPKR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaaccatcgctgacgctctggccgccaaaggctacgacaaacttactccggtc
caagaggcggtctctgatccggctcttactggtgctgatatgctggtttcagcacagaca
ggatcgggcaaaacggtcggcttcgggcttgcgattgcgccgacgcttttgggcgatggt
gatggttttgagcgggcaagcacccctctggcgttgatcattgcaccaactcgcgaactt
gcgatgcaggtaaagcgcgaactggcatggctttatgggccagccggtgcggtgatggcg
tcttgcgttggtgggatggacatgcgtgacgagcgtcgtgcgcttgaccgtggtgcacat
attgtcgtggcaacaccgggccgcctgcgcgatcatattatgcgtggttcaatcgatcta
agccagacacgcgctgtggttctggatgaagccgatgaaatgcttgatctgggctttcgc
gaagatcttgaatttatcttgggcgaagcgccggatgagcggcaaacattactgttctcg
gccactgtgccaaaggccatcgcgaaccttgcgaaaagctaccaaaaagatgcggtgcgg
gtctcgaccaaagctgaaacatcgcaacacgctgatattgaatatcatgcaatggctgta
tcacctcgcgatggtgagaacgccattataaacgtgcttcgctactacgaggcgccaaac
gcgattgttttctgcaatacccgcgcgatggtaaaccgcatcacgacacgcctgtcgaac
cgtggtttttcggttgtggcgctttctggtgagctgtcccaaaacgagcggacacacgcg
ctgcaagccatgcgtgacggtcgtgcccgcgtttgtgttgcgacagatgttgctgcgcgc
ggcattgatttgccgaaccttgatcttgttgtgcacgctgaactgccgggtagccacgag
acgatgttgcaccgttctggccgtacgggccgtgcgggtcgcaagggtgtgtctgcgctg
atcgtcacgccaaaagtgcgcaaaaaagccgaacgtattttaggtatggcaaaggttcag
gcggtgtggggccaagcgccttctgctgatgccgtgaacgcccgtgatgatgagcggatg
ttggcggatcccgcatggtctgaggcaatcgctgaaggtgagatggaagccgtatcaggt
cttgctgcccaattcacgcccgagcaattggccgctgcttatttgcgtttgtataaagcc
aaccgctctgcaccagaagagctgggtgctgccgacgctgcaccaaaaccgcgcgaagaa
tttggcgctagcacatggttctctgtggccggtggccgcaaggatggtgctgagccgcgc
cgtttgctgcctatgctctgcaaagctggtggtcttgataaagacgacatcggtgcaatc
cgaattcagcaagacgagagctatgttcaaattcgtgacgaatccgtcgaacgttttttg
gctgagattggttctgacatgaatgtggaaggcgccaagctgacgaagctggaccgggca
ccgaaccttggtgcatctggtccacgcggcggcggtgcgccgcggggtggcaagcctgcc
tataaaggctccaaacccaagggtgattggcatcctgctggtccaaaaggcgagggcaaa
ggagctgcgcgccgtgaggacgcgccgcgcaaaccgcgcaccaagaaaccccgcagtgat
gagcaagccgcagcgccgtatcgtgcgccacgtgaaaacctgactgaaacccacgaaggt
gcggttaagccgcgtagccctaaaggtgcagggaaaccaagtggaaagcccggtggaaaa
ccttctggcaagccatacggtaaatctggccccaaaggcccaccgccccctaaaggcaaa
tcaaatagcaaaaagaaccaagcgcgcaatgctgccgcaaaagccgaaggtgggccgcgt
aagccacgcaccaagtcgaatggtccaaagcgttag
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