Nereida sp. NH-UV-3: NeNHUV3_21320
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Entry
NeNHUV3_21320 CDS
T11315
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ner Nereida sp. NH-UV-3
Pathway
ner03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ner00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NeNHUV3_21320 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ner03019
]
NeNHUV3_21320 (groL1)
03110 Chaperones and folding catalysts [BR:
ner03110
]
NeNHUV3_21320 (groL1)
03029 Mitochondrial biogenesis [BR:
ner03029
]
NeNHUV3_21320 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ner04147
]
NeNHUV3_21320 (groL1)
Enzymes [BR:
ner01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NeNHUV3_21320 (groL1)
Messenger RNA biogenesis [BR:
ner03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NeNHUV3_21320 (groL1)
Chaperones and folding catalysts [BR:
ner03110
]
Heat shock proteins
HSP60 / Chaperonin
NeNHUV3_21320 (groL1)
Mitochondrial biogenesis [BR:
ner03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NeNHUV3_21320 (groL1)
Exosome [BR:
ner04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NeNHUV3_21320 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
NeNHUV3_21320 (groL1)
Exosomal proteins of breast cancer cells
NeNHUV3_21320 (groL1)
Exosomal proteins of colorectal cancer cells
NeNHUV3_21320 (groL1)
Exosomal proteins of bladder cancer cells
NeNHUV3_21320 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
ChlI
Motif
Other DBs
NCBI-ProteinID:
XHY14842
LinkDB
All DBs
Position
2145046..2146689
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFDTDARDRMLRGVNTLANAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DLATAKVVDAIKAAARPVSDSDEVAQVGTISANGEIEIGRQIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNPDKMTTELEDCLILLHEKKLSSLQPMVPLLETV
IQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTMDMLGTAKRVAITKDETTIVDGAGSKPEIEARVTQIRQQIQETDSDY
DREKLQERVAKLAGGVAVIRVGGMSEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QAGKSLDGLEGANNDQNVGISIVRKAIEAPLRQIAENAGVDGAVVAGKIRESDDKSFGFN
AQTEEYGDMFKFGVIDPAKVCRTALQDAASVASLLITTEAMVADKPAKDGGAPAGGMPDM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtcaaattcgacacagacgcccgcgaccgtatgctgcgcggcgta
aacacgcttgcaaacgcggttaaagttacgctcggccccaaaggtcgcaacgtagttttg
gacaaatcattcggcgcaccgcgcatcaccaaagacggtgtatctgttgccaaagagatc
gagcttgaagacaagtttgagaacatgggcgcgcagatggtcaaagaagtggcctcacgc
accaatgacgaagctggtgacggcacaacaactgctacagtacttgcacaagccatcgtt
aaagaaggcatgaagtctgttgcagctggcatgaacccaatggacctgaagcgcggcatc
gaccttgcaactgctaaagttgtagacgcgatcaaagcggcagcacgccctgtttctgac
agcgacgaagttgcacaagttggtaccatctctgcaaacggcgaaattgaaattggccgt
caaatcgcggacgcgatgcaaaaagtgggcaacgaaggcgttatcactgttgaagagaac
aaaggtctggaaacagaaaccgatgttgttgaaggcatgcagttcgaccgcggttacctt
tcaccttacttcgtgaccaacccagacaaaatgacaaccgagctggaagattgcttgatc
ttgctgcacgagaagaaattgtcttcacttcagccaatggttccactgctcgaaacagtg
atccagtccggcaagccacttctgatcatcgcagaagacgtagaaggtgaggcgcttgcc
acactcgtcgtcaacaaactgcgcggtggtctgaaaattgcggctgttaaggcacctggt
ttcggcgatcgtcgtaaagccatgttgcaagacatcgcgatcctgactggcggccaagtg
atttccgaagatctgggcatgaagcttgagtcggtcacaatggacatgctgggcacagcc
aagcgcgttgcgatcaccaaagacgaaacaacaatcgttgacggtgctggttccaagcca
gaaatcgaagctcgcgtgacacaaatccgtcagcagatccaagaaacagacagcgactac
gaccgtgagaagctgcaagagcgcgttgccaaactggcaggcggtgttgctgttatccgc
gtcggcggcatgtcagaagtagaagtaaaagagcgcaaagaccgcgttgatgatgccctg
aacgcgacacgtgccgctgttcaagaaggtatcgttgttggtggtggtgttgctctggta
caggctggcaaatcgcttgacggtctcgaaggtgcaaacaacgatcaaaacgttggtatt
tcgattgtgcgtaaagccatcgaagcgccactgcgtcagattgctgaaaacgccggtgtt
gacggtgcagttgttgcgggcaaaatccgcgagagcgatgacaaatcgttcggtttcaac
gcacaaactgaagaatatggcgacatgttcaagttcggcgtcatcgacccagcaaaagta
tgccgcaccgcgttgcaagatgcagcgtctgttgcatcgcttctgatcacaaccgaagca
atggttgctgataagccagcgaaagacggcggcgcaccagcaggcggcatgcctgacatg
ggcggcatgggcggcatgatgtaa
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