Nereida sp. NH-UV-3: NeNHUV3_24350
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Entry
NeNHUV3_24350 CDS
T11315
Symbol
ycf3
Name
(GenBank) Photosystem I assembly protein Ycf3
Organism
ner Nereida sp. NH-UV-3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_41
TPR_11
TPR_1
TPR_12
TPR_2
TPR_8
TPR_17
TPR_16
TPR_19
TPR_14
TPR_7
TPR_10
TPR_6
TPR_9
TPR_Slam
TPR_CcmH_CycH
TPR-S
ARM_TT21_5th
TPR_NPHP3
ANAPC3
BTAD
FAT
HAT_PRP39_C
RPN7
TPR_15
TPR_MalT
NatA_aux_su
TPR_21
HAT_Syf1_CNRKL1_N
DUF8042
ARM_TT21_C
TPR_IF140-IFT172
EST1_DNA_bind
NYD-SP12_N
HAT_Syf1_CNRKL1_C
BGLAP_C
DUF6944
Motif
Other DBs
NCBI-ProteinID:
XHY15141
LinkDB
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Position
complement(2458386..2461172)
Genome browser
AA seq
928 aa
AA seq
DB search
MAELTIDQALQQGVEAHKAGQVQEADRLYTAILKAQPKHPDANHNMGVLAVGVGKVQEAL
PFFKTALEANPSIGQFWLSYIDALIKLGKLADAKAVLDQAKSKGAKGDGFDKLEQRLKEA
EQEPLEANQIASEPQPKQPNILDSLKLDQAISLAKKKAKDGSPEEAKRIYQDILTKFPKN
KRSINGLKALAGRPVGKASKAQDPPQDQLQSVINLYSQGQLQQALKQAETLVKQFPQSAI
LFNIQGAAFKGLGQLGLSVEAYSKALAIKPDIAEAYYNMGNALKEQGKLEEAIEAYSKAL
AIKPDIAEAYYNMGNALREQGKLEEAIEAYNKSLAIKPDYVEAHINLGSAFKEQGKLEEA
IEAYNKSLAIKPDYAEAYNNMGNALKEQGKLEEAIEAYNKSLAIKPDIAEAYNNMGNALK
EQGKLEEAIEAYNKSLAIKPDYAEAYNNMGNALQEQGKLEEAIEAYNKALAIKPDYAPAR
AQCLHQLAHICDWSAIEPDLCYLLELGIKGKAATPFSMLSLEDAPDRHRLRSELYAREKL
LRKPLPAPAKPSQKPERLRIGYLSADFHNHATMYLMAQVFAAHDKSHFEIFAYSYGPDKQ
DEMRKKLVSAVDVFHDVRGMNDIQIVELARADKLDIAIDLKGFTKNARLAPFAYGLAPVQ
ISYLGYPGTLGADFIDYIVADPVVIPEDKRHHFSEQIIYLPHTYQPTDNKRIISDKLITR
EDVGLPTYGFVFCCLNNNYKISPREFDIWMRLMQKVEGSVLWLLKSNKWAEQNLKREAED
RGISAERLIFAEKVPQAEHLARQKLADLFLDTFNYNAHTTASDALWAGLPVVTKLGEGFA
ARVAGSLLAAIGLTELITENEEEYEALALTLATYPKRLGQVKSKLDGNRLTHPLFDSEMY
TRHLEAGYQMAYDRYFNEQEQSDIVVPK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtggcggaactaacaattgaccaagctctacagcagggtgtcgaggctcataaagcaggg
caggttcaagaggcggatcgtctttatacagctatactcaaagctcagcccaaacatcct
gatgctaaccataacatgggcgtactggccgtaggtgttggtaaggttcaggaagcactt
ccgttcttcaagacggcgctcgaggctaatcccagcattggccagttttggctcagctat
atcgatgctttgattaagctaggcaagttagcagatgccaaggctgtgttggatcaagcc
aagagtaagggcgctaaaggtgatggctttgataagctggagcaaaggctaaaggaggct
gaacaagaacccctagaagccaatcagatagcttctgaaccacaacctaagcagccgaac
atcctggacagcctaaaactggatcaagcgatcagtcttgcaaagaagaaagcaaaagac
ggctctcctgaagaagctaagcgtatctatcaggatattctgactaagttccctaaaaac
aagagatccattaatgggctgaaggctctagcgggtagacctgttggcaaagcgtccaaa
gctcaagatccgccacaggatcaattgcaatcagtgattaacctctacagccaagggcaa
cttcagcaggctctgaagcaggctgaaaccttggtgaagcaattcccacagtcagccatc
ttgttcaacattcaaggggccgcattcaaaggcctgggacaacttggattatctgttgag
gcttacagcaaagctctagccattaagcctgatattgctgaagcctactacaacatgggc
aatgctctcaaagagcaaggtaagctggaagaggcgatagaggcttacagcaaagctcta
gccattaagcctgatattgctgaagcctactacaacatgggcaatgctctccgagagcaa
ggtaagctggaagaggccatagaggcttacaacaagtccctagccatcaagcctgattac
gtcgaagctcacataaacttaggatcagcattcaaagagcaaggtaagctggaagaggcc
atagaggcttacaacaagtccctagccatcaagcctgattatgctgaagcctacaacaac
atgggcaatgctctcaaagagcaaggtaagctggaagaggccatagaggcttacaacaag
tccctagccatcaagcctgatattgctgaagcctacaacaacatgggcaatgctctcaaa
gagcaaggtaagctggaagaggccatagaggcttacaacaagtccctagccatcaagcct
gattatgctgaagcctacaacaacatgggcaatgctctccaagagcaaggtaagctggaa
gaggccatagaggcttacaacaaagctctagccatcaagcctgattatgctcctgctaga
gcgcaatgcctgcatcaacttgctcatatctgtgattggtctgcgatagaaccagatctg
tgctatctgctcgaattaggtattaaaggtaaagctgcaacgcctttttcaatgctttca
ttggaagatgctccagatcgccaccgattgcgatcagaactctatgcacgagaaaaactc
ctgcgaaagccgttgccagcaccagccaaaccatctcagaaacccgagcgattgcgcatc
ggatatcttagcgcagatttccataatcatgcaacgatgtatttgatggctcaggttttt
gcagcgcatgataaatcacattttgaaatatttgcgtactcttatggacctgacaagcaa
gacgagatgcgcaaaaagttagtgagtgctgtcgatgtgtttcacgatgtgcgtggcatg
aatgatatacaaattgtggagctcgctagagcggacaagctagatattgcaatcgacttg
aaaggctttacgaagaacgcaagattggcaccgtttgcttacggtttggcaccagtccag
atcagctatcttggttatccaggaacattaggcgctgatttcattgactatatcgtcgca
gatcccgttgtcattcccgaagataagcggcaccatttttccgaacagattatttatctg
ccgcatacttaccaaccaactgacaataaaaggattatctccgataaattgatcactcga
gaagatgtggggctcccgacttatggatttgtattctgctgcttgaataacaactacaag
atatctccccgggagtttgatatttggatgcgattgatgcaaaaggttgaggggagcgtc
ttatggttgctcaagtcaaataaatgggcagagcagaatctcaagcgagaagctgaagat
cgaggcatcagtgcagagcggttaatatttgctgagaaagtgccgcaggctgagcatctt
gcgagacagaaacttgcagatttgtttttggatacgtttaactacaacgctcatacgact
gcgagtgatgcactttgggcagggctgccagttgtcacaaaactgggtgaggggtttgcg
gcacgtgtggctggcagcctactggcagcgattgggctaacagaactcatcactgagaac
gaagaggaatatgaggcactagcattgacgctagcgacgtatccgaagcggcttggtcag
gtcaaatcaaagcttgacgggaatcgtttgacgcacccactttttgacagcgagatgtat
accagacatctcgaggcgggatatcaaatggcgtatgatcggtattttaacgagcaggaa
caaagcgatattgttgtgccaaagtag
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