Nitrosomonas eutropha: Neut_0384
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Entry
Neut_0384 CDS
T00393
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
net
Nitrosomonas eutropha
Pathway
net03030
DNA replication
net03430
Mismatch repair
net03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
net00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Neut_0384
03430 Mismatch repair
Neut_0384
03440 Homologous recombination
Neut_0384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
net03032
]
Neut_0384
03400 DNA repair and recombination proteins [BR:
net03400
]
Neut_0384
Enzymes [BR:
net01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Neut_0384
DNA replication proteins [BR:
net03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Neut_0384
DNA repair and recombination proteins [BR:
net03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Neut_0384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ABI58662
UniProt:
Q0AJ09
LinkDB
All DBs
Position
386028..389528
Genome browser
AA seq
1166 aa
AA seq
DB search
MLINPVFVHLRLHSEYSVVDGIVRIEEAVAKARDTGMPALALTDLSNLFGLVKFYQHACK
AGIKPIAGCDVWISNENDADRPFRLLLLCQSFSGYLLLSRLLSRAYRENMQRGRAELKKD
WFREGAGTEGLIALSGGEQGEVERLLLADPDAATTAAQEWAALFPERFYLEIQRCGRPDE
EVTNHAMLELVSGLKLPVVATHPVQFMQPEDFRAHEARVCIAQGYVLGDRRRPREFTEQQ
YFKTAAEMSELFGDVPEALANSVEIARRCSLMLELGVNRLPDFPTPAGISVEQYLRDRAQ
AGLVVRMTQLFPEAAQRDEKYPAYQARLDFEVETIIQMGFAGYFLIVSDFISWAKQHDVP
VGPGRGSGAGSLVAYSLDITDLDPLRYDLLFERFLNPERVSMPDFDIDFCQDRREQVIEY
VRDRYGAESVAQIATFGTMAAKAVVRDVGRVLDLPYNFVDQLAKLVPFELGMTLHKAREI
EPLLNQRAEAEEDVRNLLELAERLEGLTRNVGMHAGGVLIAPGKITDFCPVYCADSGDAV
VSQYDKDDVEKIGLVKFDFLGLRTLTILDRAVADIRQYQLASLGGKDAGEQSVEENRFSL
GDISLEDAATFALMAKGNTVGIFQFESRGMKDLLQKAKPDRFEDLIALVALYRPGPMDLI
PDFIERKHGKRVEYLDPRLQPILGPTYGIMIYQEQVMQIAQVIGGYSLGGADLLRRAMGK
KKVEEMAQQRAVFVEGAIRNGMMEADAVTLFSLMEKFAGYGFNKSHAAAYALIAYQTAYL
KAHYPAEFMAACMSSDMDDTDKVNVFYEDCKLNGIAILPPDINQSAYYFVPVDRKTIRYG
LGAIKGTGEAAISAIVRAREQGIAFTGLFDFCQRVDRRIVNRRTIEALIRAGAFDTVEAN
RAALMASVGMALEYAEHCSLTASQVSLFDDNADLLQQPVITEIAQWPEKEKLQYEKMSLG
FYLSGHPYDSYAKELSRFIPARLGRIAPGREPQLIAGVIYAIRTQMSRRGKMAIVTLDDG
MARVELVVYSDLLSTNSQFLKADQLLVVSAVVSHGNGENAEKRIVAKEVFDYATARSMHA
RKLRIVIDSPVLLTPAQLKELLTAYLPGSSVHNVLPSAVCPVSIDFRNEGAGCEIDLSSR
WRVHLHERLIEALMDSLGHDKVEVIY
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgctgattaaccctgtttttgttcatttgcggttgcacagtgaatattccgttgtagac
ggtattgtgcggattgaagaagcggttgccaaagcgcgcgatactggtatgccggcgctg
gcgctgactgatctgtctaaccttttcggattggtcaagttttatcagcatgcctgcaag
gctggaatcaagccgattgccggatgtgatgtctggatcagtaatgagaatgatgcggac
cggccgtttcgcttgctgctgttgtgccagtcattttccggttatttgctgctgagccgt
ctgttgtcgcgcgcctatcgggagaacatgcagcgtggtcgtgcggaactgaagaaagac
tggtttcgggagggagccgggacagaaggattgattgccctgtccggaggggagcagggc
gaagtggagcgattgttgctggcggatccagacgccgcaacaacagctgctcaggaatgg
gcagcgttattccctgaaaggttttatctggaaattcagcgctgtggccggcctgatgag
gaagtaacaaatcatgccatgctggagctggtttctggtctaaaactacctgtggtagca
acgcatccggtgcagtttatgcagccggaagatttcagagcgcatgaggcacgggtgtgt
atcgcacagggttatgtgctgggagatcgccgacgcccccgggagtttaccgagcagcag
tatttcaagacagcggcagaaatgagtgagctgtttggtgatgtgccggaagcactggcc
aatagcgtggaaattgcccgtcgctgttcactgatgctggaattgggagtcaaccggctg
ccggattttccaaccccggcgggaattagtgttgagcagtatttgcgtgatcgggcgcaa
gcagggctggttgtacggatgacacagctgtttccggaagcagcgcagcgtgatgaaaaa
tatccggcttatcaggcacggctggattttgaagtggaaactatcattcagatggggttt
gccggttacttcctgattgtgtctgactttatcagctgggcgaagcagcacgatgtaccg
gtcggaccggggcgtggttccggagcgggctcgctggtggcctattcgctggatattact
gatctggatccgctgcgttacgacttgctgtttgagcgtttcctcaatccagagcgggtt
tccatgccggattttgatattgatttctgtcaggatcggcgtgagcaggttattgaatat
gtgcgtgatcgttacggtgcagagagcgtggcgcagatcgcaacgttcggcacaatggcg
gccaaggcagtggtgcgtgatgtcggtcgcgtgctcgatctgccttacaattttgtcgat
caactagccaagctggtgccattcgagttgggtatgaccctgcacaaggcgcgtgaaatt
gagccattacttaatcaacgtgcagaagcggaagaagatgtgcgcaatctgctggaactg
gccgagcgtctggagggattgacgcgcaacgtgggaatgcatgccgggggggtattgatt
gctccagggaaaataaccgatttttgcccggtttactgtgctgattcgggggatgcggtc
gtcagccagtatgataaggatgatgtcgagaaaattgggctggtaaaattcgacttcctc
gggctgcggacattaaccattctcgatcgggcggttgctgatatccgacagtaccagttg
gcttcattgggtgggaaagatgctggtgagcaatctgtggaagaaaatcgcttttcactg
ggcgatatttcccttgaggatgcagcaacttttgcattaatggcaaaaggcaacaccgtc
ggaatttttcagtttgaatcacgcggcatgaaagatctgctgcagaaggcgaaaccggac
cgctttgaagatctgattgcgctggtggcgctttatcggccgggaccgatggatctaatt
cccgatttcatcgagcgtaaacatggcaaacgggtggagtatctggatcctcgcttgcag
ccaattctcgggccgacttacggcatcatgatttatcaggaacaggtgatgcagattgcc
caggtgattggcggttacagtctgggcggagctgatttactgcggcgcgccatgggtaaa
aagaaagtggaggaaatggcgcagcagcgcgcggtttttgttgaaggcgctatcagaaat
ggcatgatggaagcagatgccgtaacgttgttcagtctgatggaaaaattcgccggctac
ggctttaataaatcccacgcggcagcgtatgcgctgattgcttaccagactgcctatctc
aaggcacattatcctgcagaattcatggcagcctgtatgtcatcggatatggatgacact
gacaaggtgaatgtgttttatgaggattgtaagctgaacggtattgccattctgccgccg
gatattaatcagtctgcctattattttgttccggttgatcgcaaaactatccgctatggg
ttgggtgctatcaagggaacgggggaggcggctatttcggcaatcgtgcgggcacgggag
cagggaatagcatttaccggcctgttcgatttctgtcaacgagttgatcggcgtattgtt
aatcgccgtaccattgaggcgctgatccgcgcaggggcatttgatacggttgaagctaat
cgtgctgcacttatggcatctgtcgggatggcactcgaatacgcagaacattgcagcctg
actgccagccaggtcagtctgtttgatgacaatgctgatctattgcagcagccggttata
acggagatcgcacaatggccggagaaagaaaagctgcagtatgaaaaaatgtcattgggg
ttttatctgagtggtcatccgtatgacagttatgccaaagaactaagccgttttatcccg
gcgcgccttggacggattgctcccgggcgtgagccgcagctgattgccggtgtgatctac
gcgatccggacacaaatgtcccggcgtgggaagatggcgattgttacactggatgatggt
atggcgagagttgaactcgtggtttacagtgatttgctaagtacgaattcgcagtttttg
aaggcggatcagctgctggtggtaagcgctgtggtcagccatggtaatggagaaaatgct
gaaaaacgtattgtggcaaaagaggtttttgattacgcgactgctcgctcaatgcatgcc
agaaaactgagaatcgtgattgatagcccggtgcttctcactcccgcgcaactcaaggaa
ttattgactgcatatcttccaggaagtagtgtgcataatgtgctgccttcagcagtttgt
ccggtgtcaattgattttcgcaatgagggggccggatgtgaaattgacttgagcagtcgc
tggcgtgttcatttgcatgaaaggctgatcgaggcgcttatggatagtcttggtcatgac
aaggtggaggtgatttactga
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