Nitrosomonas eutropha: Neut_0498
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Entry
Neut_0498 CDS
T00393
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
net
Nitrosomonas eutropha
Brite
KEGG Orthology (KO) [BR:
net00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
net03016
]
Neut_0498
Enzymes [BR:
net01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Neut_0498
Transfer RNA biogenesis [BR:
net03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Neut_0498
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
ARB_00930_C
Motif
Other DBs
NCBI-ProteinID:
ABI58774
UniProt:
Q0AIP7
LinkDB
All DBs
Position
complement(511045..512904)
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AA seq
619 aa
AA seq
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MVNVFYEEAGALKVGNILADNTTSLQIESVHGKRSKIKAGAILLRFENPPMHEFMQQAQE
MAAEIDVDFLWECCEENNEFTGQELANDYFGHTPNPVEIAAITILLNQNPIYFHKKGTGR
YKAAPPEILRAALASREKKRLAEEKQASYVQQLVAFELPDTFRPLLDDLLYKPDKNTIEW
KALEAACAATRLSVPRLLEQCGAIPSTHDYHFNQFLYEHFPEGTSTDSLPSDFHRTDPED
FPLAEVTAFSIDDAATTEIDDAFSVTPLTFGSFRIGIHIATPALGVAPDSLLDKFAAKRL
STVYLPGRKITMLPESVIQHFTLSETRRRPVLSLYLDVADDFTVTNTLSRIETIEVSTNL
RLDVLEQQFNEITLRENQANYPFAHELRVLWDFSNKMEKLRGKDQDINSEKVDYSFTIEQ
DRVSISERRRGAPIDKVVSELMIFANAEWGKQLADAGFAGIYRSQGNGKVKMSLSPAPHQ
GLGVSQYTWSSSPMRRYVDLINQRQLIALVSGNPPAYTREDDALLIAMRDFEMAYATYAE
FQRGMERYWCLRWLLQENINTTGAVVVKENLVKLDRLPLIARVPSLPDLSPGTFVTIGIS
QIDLLDRTLHASFLGKRED
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaacgttttttacgaggaagcaggggctctcaaagtcggcaatatcctggctgac
aacaccacctcgctgcaaattgaatccgtccatggaaaacgctccaaaatcaaggctgga
gcgattttgctgcgctttgaaaatccacccatgcacgaattcatgcagcaggcacaggaa
atggctgctgagattgatgtggattttttatgggaatgttgcgaagagaacaatgaattc
actgggcaggaactggcgaacgattattttggccatacgcccaaccctgttgaaatcgct
gccatcacgattttgctgaaccagaatccgatctatttccataaaaaaggaaccggccgc
tacaaagccgcccccccggaaattttgcgggccgcactggccagccgcgaaaaaaagcga
ttggccgaggaaaaacaggctagttatgtgcagcagctggtggcattcgagttacctgat
acattcaggccattactggatgatctactgtataagccggataaaaatacaattgaatgg
aaagcactggaagcagcctgtgcagccaccagactgagtgtccccagattgctggagcaa
tgcggcgccattccttcaacacatgactaccatttcaaccagtttttatatgaacacttc
ccggaaggaaccagcacggattcccttccatctgatttccaccgcacggacccggaagat
tttccgctggctgaagtcacggcgttcagtattgatgatgctgccacaacagaaatcgat
gatgccttttctgtaacgccgctaacatttggcagtttccgcattggaatacatattgct
acgcccgcactgggtgttgcaccggattcgcttcttgataaatttgcagcaaaacgcctg
tcaacggtttatctgcctggccgcaaaatcaccatgcttccggaaagcgtaattcagcat
ttcacactgagcgaaacacgccgccgtccggtgctctcgttatatctggacgtggcggat
gattttactgtcaccaacacactcagccggatagaaaccatcgaagtttctaccaactta
cgcctcgatgtactggaacaacagtttaacgaaattaccttgcgtgaaaatcaggcaaat
tatcctttcgctcatgagttaagagtgctctgggatttttccaacaaaatggagaaattg
cgtggtaaggatcaagatatcaatagtgagaaagtggattacagttttactattgaacaa
gatcgtgtttctatttccgaacggcgccggggcgcacccatcgataaagtcgtatcagaa
ctgatgatttttgccaacgccgaatggggcaagcaactcgcagatgccggcttcgccggg
atttatcgtagccagggaaatggcaaggtgaagatgagcctttctcccgcgccgcatcag
ggactgggggtatcacaatacacctggagcagctcccctatgcgacgttatgtggatctt
atcaatcagcgtcagttgattgcattggtatcgggtaatccacccgcctatacccgggaa
gatgatgcgctgctgatcgccatgcgggattttgaaatggcctatgcaacctacgcggaa
tttcagcgtggaatggaacgctactggtgccttcgctggttattgcaggaaaacatcaat
acaaccggtgcggttgttgtaaaggaaaatctggttaaactggatcgcttgccactgata
gcccgggtgccttcattacccgatctctccccaggcacattcgttaccatcggcatttcg
cagatcgatctgctggatcgcacgctccatgccagctttcttggtaagcgtgaagactga
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