Nitrosomonas eutropha: Neut_1336
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Entry
Neut_1336 CDS
T00393
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
net
Nitrosomonas eutropha
Brite
KEGG Orthology (KO) [BR:
net00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
net03019
]
Neut_1336
Enzymes [BR:
net01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Neut_1336
Messenger RNA biogenesis [BR:
net03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Neut_1336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
NACHT
T2SSE
ResIII
SLFN-g3_helicase
AAA_23
ABC_tran
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABI59586
UniProt:
Q0AGE6
LinkDB
All DBs
Position
complement(1400280..1404041)
Genome browser
AA seq
1253 aa
AA seq
DB search
MAPPSESITRITYPEELPVVARREEIARAIAQHQAVIICGETGSGKTTQLPKICLELEHS
IGEQRGAKKLIGHTQPRRIAARTVAARIATELNSPLGQLVGYKVRFSDQTHPDTRIKLMT
DGILLAETQQDPMLRAYQTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIITSATIDA
QRFASHFNNAPVIEVSGRLFPVEIHYRSFNDQADGEERDLSRVILNVVDEAMHMGEGDML
VFLPGEREIRETAEILRKHTFSGPGSRAGTEILPLFARLSHTEQARIFMPGQRRRIVLAT
NVAETSLTVPGIRYVIDTGLARINRYSYRNKVEQLLIEKISQASANQRAGRCGRVMNGVC
FRLYSEEDFAARPQYTDPEILRSSLAAVILRMKSLKIGDVEQFPFIQPPAARMIADGYQL
LSELGALNEQKGLTQTGHQLARFPIDPKIARMIIAARQENCLTEVLIIASALSLQDPRDR
PFEHQQAADQAHQLFRDDRSDFIGYLKLWDFYNDLLKHKKSNRKLIEQCQKNFISHRRMR
EWREIHGQLHTQIQEMGLRPNQVPASYDEIHRALLSGLLGNIGFKSDEKGIYEGARAIKF
SIFPGSSLRKKQPKWVVAAELAETTKLYARCVAAIDPIWLEKIAGKLCKKHYFDPHWEKQ
RAQAVVFERVTLYGLTIVPKRCVAYGPIDPAHAREIFIREALVARAYKSNAPFLQHNQQL
IDEICELESKVRRQDILVDDQQIFEFYAARIPADISSGNTFEKWRKQVEQIDPRLLYLTR
EMLMRQAADAATIEQFPETLVVAGHDLPLSYHFDPGHPLDGVTVTIPLPLLNQFIPFHFD
RLVPGLIREKVTWYVKMLPKPIRRHAIPVPQFVTRFLEWLDTCPDQAVLLAESLSIFIRN
ETGIKVPLDSWDDKSLPVHLQMNVKVIDDAGTTLGMGHDLAELKAQFGQTAQQLFTRGAG
AEPNSIERDGITQWDFGELPQETRFNRGNQQLTGYPALVDQEQSVAIRIFDTQQGAQHSM
RGGVRRLLCLALKDRIRQLEKNLPVDQKAILLMSNLIEIGRLREDIRSAIIDLALIGDDP
LPRNEHEFTAQSTRARTRLGAISQEMAELIQTIAQPCQELKKRLATLEKSVAFLKKDLET
QLHHLIYPGFLSTTRWQYLQHLPRYLRGMILRLDKYNKNPERDQEQTEIVTTLWEQYEQR
LYKHRQASVTDPNLEIFRWQIEELRISLFSQELKTPMPVSVKRLQKLWESVHE
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
ttggcacctccctccgaatcaattacccgcatcacctatccggaagaactgccggtcgtc
gcgcgacgtgaagaaatcgcgcgcgcgatcgcgcagcatcaagccgttattatctgtggt
gaaaccggttccggcaaaaccacgcagttaccaaaaatatgcctggaactggaacatagt
attggagagcagcggggtgccaaaaaactgattggtcatacccagccccggcgtattgct
gccagaaccgttgctgcacgtattgccacggaactgaacagcccgcttggacaactggtc
ggctataaagtccgcttctctgatcagacgcatcctgatacacgtatcaagttgatgacc
gatgggatcttgctggctgaaacacagcaagatcccatgctgcgcgcctatcaaaccatc
atcatcgatgaagcgcatgagcgcagcctgaatatcgatttcctgctcggctatctcaag
caattactgccgcgccgtccggatctgaagctgattattacatccgccaccattgatgcc
cagcgctttgcttcccattttaataatgcacctgtcattgaggtatctggcagattattc
ccggtagagatccattaccggtcgttcaacgatcaggcagatggtgaggagcgtgatctg
tcccgagtcattctgaatgtggttgatgaagccatgcacatgggggagggagatatgctg
gtattcctgcccggagaacgggaaatacgggaaaccgcagaaatcttgcgtaaacacacc
ttttccggccccggtagcagggctggcacagagatcttgcccctgtttgcccgattgtcc
cacacagaacaggcgcgtatttttatgcctggccaacggcgacgcattgtgctggccacc
aacgttgccgaaacttcactcacggttcccggtattcgctatgtgattgataccgggttg
gcacgcattaatcgttacagctatcgcaacaaggtggagcagctgctgatcgagaaaatt
tcccaggcttcggccaatcagcgtgctggacgatgcggcagggtgatgaacggcgtatgt
tttcgcctgtattcagaagaagattttgctgcccgcccgcaatataccgatccggagatt
ctgcgttcctcgttagcggcggttattttgcgcatgaaatcgctgaaaattggagatgtg
gaacagtttccgtttattcagccgcctgctgcgcgcatgattgccgatggttaccagctt
ttatcggaacttggtgcgctgaatgagcaaaaagggctgacacaaaccgggcatcaactg
gcaaggtttcccatcgatcctaaaattgcccgcatgattattgccgccaggcaagaaaac
tgcctgaccgaagtgctgatcatcgcttccgccctcagtctgcaggatccgcgtgatcga
ccatttgaacatcaacaggcggctgatcaagcgcaccagctattccgcgatgatcgctcc
gatttcattggttatctcaaattgtgggatttctataacgatctgctcaaacacaaaaaa
tccaatagaaagctgattgaacaatgtcagaaaaattttatttcccatcgcagaatgcgg
gaatggcgcgagattcacggccagttgcatacgcagattcaggaaatggggttacgtcct
aaccaggttcctgccagttatgatgaaattcaccgggcgctgctgtccggcctgctaggt
aatatcggcttcaaatcggatgagaaggggatatacgaaggtgcgcgtgcaatcaagttt
tcaattttccctggatcatccctgagaaaaaaacagccgaaatgggtagttgcggccgag
ctggcagaaaccaccaaactttatgcacgttgtgtagccgccatcgatccaatctggctg
gaaaaaatcgctggcaaactgtgtaaaaaacactactttgatccgcactgggaaaaacag
cgcgcacaagctgtcgtgtttgagcgtgtcaccctgtatggcctgaccatcgtacccaaa
cgatgcgtggcttatggcccgattgacccagcccatgcacgcgaaatttttatccgtgaa
gcattggtcgcaagagcatataaaagcaatgcacctttcctgcagcacaatcagcagttg
attgatgaaatctgcgaactggaaagcaaggtgcgaaggcaggatattctggtggatgat
cagcagatattcgagttttatgctgcgcgtattcctgcagatattagtagtggcaatacc
tttgaaaaatggcgcaagcaggtagaacagattgaccccaggctgttgtacctgacgcgg
gaaatgctgatgcggcaagctgcagatgcagcaaccatcgagcagtttcctgaaacactg
gtagtagctggccatgatctgcccttgagctaccactttgatcccggtcatcctctggat
ggggtaacagttaccatcccgctgccgttactcaatcaattcataccgtttcatttcgac
cggttggtaccggggttaatccgggaaaaagtgacctggtatgtgaagatgttacccaag
ccgatccgccgccacgccattccggtgccgcaattcgttacccgctttctggaatggctg
gacacctgcccggatcaggctgtgctgcttgctgaatccctgtccatattcatccgcaac
gaaactggaatcaaggtgccgctggatagctgggatgacaaatcgttacccgtgcatttg
caaatgaatgtcaaagtgatcgacgatgccggcaccacgctgggcatggggcatgatctg
gctgaattaaaagcacaatttggccagacagcacagcaattatttacgcgtggcgcggga
gcagagcccaattcaatcgagcgtgacggcatcacccaatgggattttggagaattacca
caggaaacccgttttaaccggggcaatcagcaactgaccggctatccggcactggttgat
caggagcaaagtgttgccattcgtatatttgatacgcagcaaggcgcgcaacacagtatg
cggggaggggtgcggcggttgttatgccttgcgcttaaggacagaatcaggcaactggaa
aaaaatttacccgttgatcagaaagcaatcctactcatgagcaatttaatcgagattggc
aggctcagggaagatatccgttcggccatcattgatctggctctgatcggcgatgatccg
ctaccgcgtaacgaacatgaatttaccgcacaatctacacgtgcacgtacacggctggga
gctatttcgcaggagatggccgagctgatccagacgattgcccaaccttgtcaggaattg
aaaaagcgactagccactctggaaaaatcagtggctttcctgaaaaaagatctggaaaca
cagctgcaccacctgatttatccgggattcctgagcacaacccgctggcagtacctgcaa
cacctcccgcgttatctcagaggcatgattctacgcctcgacaaatacaacaaaaatccg
gaacgcgaccaggaacaaaccgaaattgtcaccacactgtgggaacagtacgaacaacgc
ctgtataaacaccgccaggccagcgtaaccgacccgaatctggaaatattccgctggcaa
attgaagaactgcgtatttccctgttcagccaggaactgaaaacccccatgcctgtatca
gtcaaacgcctacaaaaactgtgggaaagcgtgcatgagtag
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