Entry |
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Name |
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
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KO |
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Organism |
net Nitrosomonas eutropha
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:net00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Neut_1355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:net03400]
Neut_1355
Enzymes [BR:net01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Neut_1355
DNA repair and recombination proteins [BR:net03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Neut_1355
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1419881..1423447
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AA seq |
1188 aa
MPEGQGQFTNGFMVIHGNQPELLRQLLVHWFKAHSLDPLEDEIILVQSNGIAQWLKLALA
ANTTDTPGSGCGIAAALDMLLPARFIWRVYRAVLGPDAVPDISPFDKPLLIWRLMRLLPD
VIPLPGYEPLARFLEQDSDLRKRYQLAEKIADLFDQYQVYRADWLAAWARGEHVLYNTHH
IARPLDATHCWQAMLWRALLEDVGVASQSSRAVVHQRFLDAAKKLKNRPDGLPRRVSVFG
LSSLPRQSLEVLLAISPVTQILLCVHNPCEHYWANLLSEKDHARRTSNRHAHKNNTPATI
TEDALHLYAHPLLAAWGKQGRDYIALLDELDEPDAYRARFEQVGERIDLFQSHGESTLLN
QLQDDIRLLRTVDESRDTWPAIDPASDRSIRFHRAHSVQREVEILHDQLLAAFNADATLR
PRDVIVMVPDVNAYAPYIEAVFGQVEHSDARYIPFSMADLTQRQQAPLIFALEFLLDVPE
SRLTVSDLLDLLNVPAVRQCFGIGINDLPRLHQWIRQTNIRWGLSARHRAKFIQESLEQN
TWAQGLKRMLLGYAVGCDPTGREDYSWRDIEPYGEVSGLEAALTGSLSRLLIQLETLTET
FAEPATPAIWGQRLQFLLQGFFKSETAEDTALLLQLQTSLHAWLEACTAASFTEMIPLAV
IREHWLAQIDQPNLAQRFMAGELTFATLMPMRAIPFRMVCLLGMNDGEFPRTHPPVDFDL
MARDIRPGDRSRREDDRYLFLEALLSAREKLHISWVGKSILDNSDLPPSVLVSQLRDHIA
ACWQLADSPDNDLLAALTVEHKLQAFSQDYFDKDPATSALFTYAREWERKLISPAAPAAT
EPSLSLPVFNSPVSLGQLIAFLKDPVKTFCRERLGIYYEMDDLTSEDHEPFILNGLEQWS
LQDQLIQARLDAVNHENDETVAVEQQLDRVRRRGELPLGGMADLLKATLADPLDKMFKCY
REAIASWPFPLEDQIFEYPYVTTNGVAITVQGRITQHYCMHDASNTSNTSNGDKYCRIEL
SSSDLLKNNKCRHDKLLAAWIFHLAAHLDGQPITTRIIGKNDPVQINPLTPDLARQYFNM
IIEAYVNGLCTPLPLAPKTGFAWLEKEGMPFNGPLAACKQKAVGTARSQYEDDYQRTGEA
SQSIYLQRFYPAFAQLWSNGRFTQLCDDLYAPLMHHADTPGANTKNPE |
NT seq |
3567 nt +upstreamnt +downstreamnt
ttgcctgaaggccagggtcagtttacaaacggtttcatggttatccatggcaatcagccc
gagcttttgcggcagttgctggtgcactggttcaaggcacattcgctagatccactggaa
gatgaaatcattcttgtgcaaagcaacgggattgctcaatggctcaagctcgcgctggca
gcaaatacaacagatactcccggcagtggttgtggtattgcggcagcactcgatatgctg
ctgcccgcccgctttatctggcgggtttatcgggccgtgctggggcctgatgctgtgccg
gacatctccccatttgataaaccgctgctcatctggcgcttgatgcgtctcctgccagac
gttatcccccttccgggttatgaacccttggcacgttttctggaacaggacagtgatctt
cgcaagcgctaccagctggctgaaaaaattgccgaccttttcgatcagtaccaggtctat
cgtgccgattggctcgccgcctgggccagaggggaacatgtactgtacaacactcaccat
attgctcgcccgctcgatgcgactcactgctggcaggctatgctgtggcgcgctttgctt
gaagacgtgggagtcgccagccagagcagccgggcagttgtgcatcagcgttttctggat
gccgccaagaaactgaaaaaccggcctgacgggctgcctcgccgtgtttctgtatttggt
ctgtcttcactgccgcgtcagtcgctggaagtattactggccatctcgcctgtcacgcag
attcttttgtgcgtccacaatccctgcgagcattattgggccaatcttctctctgaaaaa
gaccacgcccggcgaacctcaaaccggcatgctcataaaaacaatacacctgcaactatc
acggaagatgctttgcatctgtatgcccatccattactagctgcgtggggaaagcagggc
cgtgattacattgccctgctggatgagctggatgaacctgatgcctaccgcgcccgattt
gaacaagtcggcgagcggattgatctgtttcagagccatggagaatcaacgctgctgaac
cagttgcaggacgatatccgcctgctgcgaacggtggatgaatcacgcgatacctggccg
gcaatcgatcctgccagcgatcgctcaattcgctttcatcgcgcgcacagcgtacagcgc
gaggttgaaattctgcatgatcaactgctggcagcattcaatgcagatgcaacactgcgg
ccgcgtgatgttatcgtgatggtgcctgatgtaaatgcctatgcaccctatattgaagca
gtttttggacaagttgagcattctgatgcgcgttatattccattttcaatggctgatctc
acgcaacgccagcaagcgccacttatatttgccctggaatttttgctggatgtgccagaa
tcacgcttgactgtcagtgacctgctcgatctgcttaacgttccagctgtcagacagtgt
ttcgggatcggcattaatgatttgccacgcctgcatcaatggatcagacaaaccaacatc
cgctgggggttgagtgcccgccatcgcgcgaaatttattcaggaaagtcttgagcaaaat
acatgggcgcaagggctcaagcgtatgttattgggctatgccgtcggctgtgatcccacc
ggacgcgaagattacagttggcgtgacattgaaccctatggtgaggtttcagggctggaa
gccgcgctgactggctccttgtcccggttgctgatccaacttgaaacacttaccgaaacc
tttgcggagcctgccacacctgccatttggggccagcggttgcaattcctgcttcagggc
tttttcaagagcgagacagcagaagacacagccctgcttttgcagttgcaaaccagcttg
catgcctggcttgaagcttgtacagccgccagttttaccgaaatgatcccgctggctgtt
atccgtgaacactggctggcccaaattgatcagcctaacctggcgcaacgcttcatggcc
ggcgaactgacctttgcaaccttgatgccaatgcgtgccattccgttccggatggtctgc
ctgctcggcatgaatgatggtgaatttccccgtacccacccacccgttgattttgatctg
atggcacgggatatacgcccgggcgatcgttcccgccgggaagatgatcgttatctgttt
ctggaagcgctgctctccgctcgggagaaactgcatatcagctgggtgggcaaaagcata
ctggataattccgatctaccgccatccgtactggtcagccagttgcgggatcacatcgca
gcctgctggcaattggcggattccccggacaacgatctgctggctgccctgacggttgaa
cacaagttgcaagctttcagccaggattattttgacaaggatccggccacctcagcgttg
ttcacctatgcgcgcgaatgggagcgcaaacttatcagtccagcggctccagctgctacg
gagccttctttgtcattgcctgttttcaatagccctgtctcgctcggacagctgatcgcc
tttttgaaagatcccgtcaaaaccttctgccgtgaacggctgggtatttattacgaaatg
gacgacctgaccagcgaagatcacgagcctttcattctgaatggactggaacagtggtca
ctccaggatcaattgattcaggctcgactagatgctgtcaatcatgaaaatgacgaaaca
gtcgcagtggaacaacaactggatcgcgtccggcgacgaggtgagctgccgcttggcgga
atggcagatttgctgaaagcaaccctggctgatcctttggacaaaatgtttaagtgttat
cgcgaagcgattgccagttggccatttccgctggaagaccaaatatttgagtatccatac
gtcaccactaatggtgtggcaatcactgtgcaggggcgcatcacacaacactactgtatg
catgatgcaagcaacacgagcaatacaagtaatggtgataaatactgccggatcgaactg
agttccagcgatttgctgaaaaataacaaatgccgtcatgacaaactgcttgctgcttgg
atattccacctggccgcacatctcgatggccagccgatcacaacacggatcattggcaag
aatgatccggtacaaattaatccactgacgccggatctcgccagacagtacttcaacatg
attattgaagcctacgttaacggcttgtgtacgccgctgccactggcgcccaaaaccggt
tttgcctggctggaaaaagaagggatgccttttaacggccctcttgcggcatgtaagcaa
aaggctgttggcactgcccgcagccaatatgaagatgactatcagcgtactggtgaagcc
agtcagagcatctatctacagcgattttatccagcctttgcacaactgtggtcaaacggc
cgctttacgcagctttgtgatgatctgtacgcgccgttgatgcaccatgccgacacacct
ggggcaaataccaaaaatccggaataa |