Nitrosomonas eutropha: Neut_1356
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Entry
Neut_1356 CDS
T00393
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
net
Nitrosomonas eutropha
Pathway
net03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
net00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Neut_1356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
net03400
]
Neut_1356
Enzymes [BR:
net01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Neut_1356
DNA repair and recombination proteins [BR:
net03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Neut_1356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_25
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABI59604
UniProt:
Q0AGC8
LinkDB
All DBs
Position
1423463..1427149
Genome browser
AA seq
1228 aa
AA seq
DB search
MSQNITPLDLFTLPLTGSHLIEASAGTGKTFTIAMLYVRLILGHQGEFAFSGGALTPPEI
LVVTFTEAATKELRDRIRARLTEAARLFRADPINAQSLNDTDPLQQLLFEYSPAEWAACA
RKLELAAEWMDEAAISTIHGWCNRMLREHAFDSQSLFTQELETDQTELRAEVVRDYWRIF
YYPLTLEEIVWINGYWKSPTELGKAVTPLLDYVDQLPDLSATDPSTIISASQENKQNLLT
KLKQPWALWADELQALLDAAEAAGQIDGRKLRADWYTNWLNKLRDWANDPAMDNVDIGKG
WERLTSEGIAKAWKKGTSPHHPAFDTIPVLKEALNNLPDPRIELLSHAACWIAKKFDTIR
KHRSQIGFNDLLTGLETALTGLYGERLAQVIRQQFPVALIDEFQDTDPVQYRIFEYIYEI
SSNRNDCALILIGDPKQAIYAFRGADIHTYLKARRAVEGRLYTLNTNFRSTQAMVDAVNH
CFASVENQADSRGAFLFRTGDGNPVPFLEVQANGRRDTFQIEGETLPAMLLAVSAQQMEL
SKTDYIEQMSALCATRIVDWLNDGKSAKAGFAGQDMSFRAVRPGDIAILVNNGNEAANIR
QALLQRGVRSVYLSDKDTVYATRQATEVHRWLAACAEPDNDRLLRAALSTTSLGLTLAEL
DALNTDEAAWEAQVIQFKGYRELWQKQGVLPMLRRILVDFKCGDRLLALKENLNGQSGER
ILTDLLHLAEILQQASFTLEGEHALIRFLAEQIAAPEGEADSKKLRLESDSDLVKVVTIH
KSKGLEYPLVFLPFICITRPIKNSDIPLKWHDDQGTLKISLAAHPEIMARADLERLREDV
RKLYVALTRACYLTWMGLAPIKNKSSAVGHLFRLKATPAEQYLDALQSFVQERPDFCVTD
KPDNNLEQYVAETRSAPPGEACRPLRMVRENWRISSYSALRVDGNVPSTRIAQEDTPQAE
NLLEEQLERSFISLQPVSEQPASVTIHHFFKGAEAGIFLHELMEWVANTGFTIVSSDETD
LRDTIERRCKMRHWETWVAPLVDWVKRMLSTSLPFGSIGICLNTLTVVKAEMEFWAEASN
VDLTLLDAAVIEQTLASRPRPHLTQSELNGMLKGFIDLVFQYDGRYYVADYKSNWLGATD
QDYTVAAMDEVIRANRYDLQYVIYLFALHRLLKSRLPDYNYEQHVGGAACLFVRGIDAPT
AGVHFERPPGTLMDTLDELFAGKTEGSA
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacatcacaccacttgatctctttaccctccctttgaccgggagccatctg
atcgaagccagcgccggtactggcaaaactttcactatcgccatgctctacgttcgcctg
atcctgggacatcagggggaatttgccttttccggtggcgcattgacacccccagaaatt
ctggtggtaacttttacggaggccgccaccaaggaactacgcgatcggattcgcgcacgt
ctgacagaagccgcccgcctctttcgagctgacccaataaatgcgcaatcactgaacgat
actgatccgctgcagcagttgctcttcgaatactcacctgccgaatgggctgcctgcgcc
cgcaaactggaactggcagctgaatggatggatgaggcagccatctcgaccattcatggc
tggtgcaaccggatgctgcgggaacatgcctttgatagccaaagtctctttacccaggag
ctagaaactgatcaaacagaattacgggcagaagtggtacgggactattggcggattttt
tactacccgcttaccctggaagagattgtctggattaatggttattggaaaagccctacc
gaactgggaaaggctgtcacccccctgctcgattatgtggatcaattgcctgatttatct
gctacggatccatcgaccattatcagtgccagccaggaaaacaaacagaatctactgacc
aagctcaaacaaccttgggcactttgggcagatgaattacaggcgctgcttgatgctgct
gaggcagccggccagattgatgggcgcaaactgcgtgctgactggtacaccaattggtta
aataagctgagagattgggccaatgatcccgccatggataacgtagacattggtaagggt
tgggagcgtttgacgtcggaagggatcgcgaaagcatggaaaaaaggtacctccccccat
catcccgcattcgacacaattcctgtgctaaaggaagcacttaataacctgcccgatccc
aggattgagctgctaagccatgctgcctgctggattgccaaaaaatttgacaccattcgg
aaacaccgttcccagatcggtttcaatgatctgctgaccggccttgaaaccgccctcacc
ggcctttatggcgagcggctggctcaagtcatccgccagcaatttccggttgcgctcatt
gatgaatttcaggataccgatcccgttcagtaccggatttttgaatatatttatgagatt
tccagcaatcgaaatgattgtgcactcatcctgatcggtgatcccaagcaggcaatctac
gctttccggggagcagatattcatacctatctcaaggcccggagagcagttgagggacga
ctctacacgctgaatacaaatttccgctcaacccaagcgatggttgatgctgtcaatcat
tgctttgcatctgttgaaaaccaggcggattctcgcggcgcattcctgttcagaaccgga
gatggtaaccccgtgcctttcctggaagttcaagccaatggtcgcagggatacattccag
attgagggagagacattgcccgccatgctgctggctgtttcagcccaacagatggaactc
tcaaaaaccgattacattgagcagatgtctgccctctgtgcaacccggatcgttgactgg
ttgaacgacgggaaatccgcaaaagccgggtttgccggccaggacatgtctttccgggca
gtcaggccaggggatatagccattttggtcaataacggaaatgaagccgccaacatccgc
caggctttgctgcaacggggcgtccgttcagtgtatttgtccgataaggacacggtttat
gccacccgtcaggcaaccgaagtccatcgctggctagctgcctgtgctgaacctgacaac
gatcgcctgctacgcgccgcgctgtccaccacatcgctgggcctcacgctagcagagctt
gatgctctcaatacggatgaagcggcgtgggaagcccaggtaattcaattcaagggctat
cgcgagttatggcaaaagcagggagtgctcccgatgctgcgccgcatcctggttgatttt
aaatgcggcgatcgcctgcttgcgctcaaggagaatctcaacggccagagcggagaacgc
atcctgactgacctgcttcatctggcagaaatattacagcaggcaagctttacgctggag
ggtgaacatgcgttgatccgttttctggccgagcaaattgctgcccccgagggggaagca
gatagcaaaaaactgcgtctggaaagcgatagcgatctggtgaaagttgtcaccattcat
aaatcaaaggggcttgaatatccgctggttttcttgccgttcatctgcataacccggcct
atcaaaaatagtgatatcccgctcaaatggcacgacgatcagggcacattaaaaatttcc
cttgctgctcaccccgaaatcatggcacgtgccgatctggaacgcctccgtgaagacgta
cgcaagctttatgtggcattgacgcgtgcctgctatctgacttggatgggcttggcaccc
atcaagaacaagtcaagcgcggttggtcatttgttcagattgaaagctaccccggctgaa
caatatcttgacgctctccagtcttttgtacaggaacgccctgatttctgtgtgacggac
aaaccggacaacaatcttgagcaatacgttgcagaaacccgatccgccccgccgggtgag
gcttgccgcccgctgcggatggtgagagaaaactggcgcatcagcagttattcggcgctt
cgggttgatggtaatgttccatccacgcgaatagctcaggaagatacaccgcaggcagaa
aatctcctggaagagcaactcgaacgctcattcatctcactacagcctgtttcagaacaa
ccggcaagcgtgaccattcatcattttttcaaaggagctgaggcgggcatctttctgcat
gaactgatggaatgggtcgccaacaccggctttactattgtatcgagtgatgaaaccgac
ttgcgtgacaccattgagcgtcgttgcaagatgcgccactgggaaacctgggttgcacca
cttgttgactgggtcaagcgcatgctgtccacatccctgccgtttggctcaattggaatt
tgcctcaatacgctgactgttgttaaagccgagatggaattctgggctgaagccagcaat
gtcgatctgactctactggatgccgccgtgatcgaacagacactggcaagtcgcccgcgc
ccgcatctgacacagagtgagttaaacggaatgctcaagggttttatcgatctggttttt
caatatgatgggcgctattacgttgcggattacaagtcaaactggctcggtgccacagat
caggattacactgtggctgccatggacgaggtgattcgtgccaaccgttacgatctgcaa
tacgtcatttatctgtttgccttgcatcggctccttaaatcccgtctgcccgattacaat
tacgaacaacatgtgggcggtgccgcctgtctcttcgtgcgcgggattgatgcacccaca
gccggtgtccattttgaacgccccccgggaacgttaatggacacgctggatgagctattt
gccgggaagacagaaggtagcgcatga
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