Nitrosomonas eutropha: Neut_1668
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Entry
Neut_1668 CDS
T00393
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
net
Nitrosomonas eutropha
Pathway
net03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
net00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Neut_1668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
net03019
]
Neut_1668
Enzymes [BR:
net01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Neut_1668
Messenger RNA biogenesis [BR:
net03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Neut_1668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_19
PhoH
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABI59909
UniProt:
Q0AFH3
LinkDB
All DBs
Position
complement(1762894..1764360)
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AA seq
488 aa
AA seq
DB search
MSSDVTFEQLDLSSEILRAVIDEGYINPTPIQAQVIPPILAGKDVMASAQTGTGKTAGFT
LPLLHHLQAHASSSTSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTTVVFGGVN
IEPQITELRNGVEILVATPGRLLDLVEHKAVNFSKTEILVLDEADRMLDMGFLPDIKKVM
ALLPSQRQSLMFSATFSDEIRKLADGLLKHPVRIEVAAQNTINESISHVVHRIKPESKFA
LLLHLVKQQDLKQALVFVKTKHGASQLAQMLSHHKILALAIHGDKNQQQRTQALSEFKHG
DVQILVATDVAARGIDIEKLSHVVNYELPGNPEDYVHRIGRTGRAGSKGKAISLVSEHET
ELLTSIEKLLNTKLEIEQIAGFDAELFVRSLPDRKNRVSADIARRSNKQAEVANGEKTRK
YSGSRRSALQNHKDPIFTQPYIPQANPVQLATPKQSDAQSLLLAYRQEKKIIPALFTALT
KNKAEQNN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgatgtaacttttgagcagctggacttgtccagtgaaatactccgggcagtt
attgatgaggggtacattaatccaactccgatccaagcccaggttattccgccgattctt
gccggcaaagatgtcatggccagtgcacagacgggtactggtaaaacagccggctttact
ctgcctttattgcaccacctgcaagcacatgcgagctctagtacgtcgcctgcccgccat
cctgtacgtgctttgattatggctccaacgcgtgaactggccatgcaaattgatgaaagt
gtcaggaagtatgggaagtatcttgctttgcgaaccactgtcgtttttggcggggtcaat
atagaacctcagataacagagttgcggaatggggtggaaatactggtagccacacctggt
cgattgctggatctggttgagcacaaggctgtaaatttctcaaaaacagaaatcctggtt
cttgacgaggccgatcgtatgctggatatgggctttctgccggatatcaaaaaagtgatg
gcgttgttaccttcacagcgacagagtctgatgttttccgcaactttctccgacgagatc
agaaaacttgcagacggtttgctgaaacatccggttcggattgaagtggcagcgcagaat
acaataaatgagtctatttcacatgttgttcaccgcataaaaccagaaagtaagtttgca
ttgctgctgcatctcgttaaacagcaagatctgaaacaagcacttgtttttgtgaaaaca
aagcacggagcctcccaactggcacaaatgctttctcaccataaaatcttggcgcttgca
attcatggagataaaaatcagcaacagagaacacaagcactttctgagttcaaacatggt
gatgtgcagatacttgtagcaacagatgtagctgcgcgtggcattgatattgaaaaatta
tcgcatgtggtcaattatgaattgcccggtaatcccgaggactatgtgcatagaattggc
cgtacaggccgtgctggtagtaaaggaaaggcaatttctctggtaagtgaacatgaaaca
gagcttctgaccagtatcgaaaaacttctgaacactaaactggagatagagcagattgct
ggttttgatgcggagttatttgtcaggagcttgccagatcgtaaaaatagggtatcagcc
gatattgcccggcgtagcaataagcaagccgaagttgctaatggtgagaaaaccagaaaa
tattccggatcacgcagaagcgcgctacaaaatcataaagaccccatttttacgcaaccc
tatattccacaagcaaatccagtgcaattggcaactcctaagcaatcagatgctcaatct
ttgcttctcgcatacaggcaagaaaaaaagattatccctgcgttatttactgctcttaca
aaaaataaagctgagcagaacaactag
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