Nitrosomonas eutropha: Neut_1794
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Entry
Neut_1794 CDS
T00393
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
net
Nitrosomonas eutropha
Pathway
net03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
net00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Neut_1794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
net03021
]
Neut_1794
03400 DNA repair and recombination proteins [BR:
net03400
]
Neut_1794
Enzymes [BR:
net01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Neut_1794
Transcription machinery [BR:
net03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Neut_1794
DNA repair and recombination proteins [BR:
net03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Neut_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ABI60028
UniProt:
Q0AF54
LinkDB
All DBs
Position
complement(1899317..1903531)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKALLDLFKQVTQKEEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSRIRRERMGHIELASPVAHIWFLKSL
PSRLGLVLDITLRDIERVLYFEAYIVTDPGMTPLTRGQLLTEDDYLNKTEEFGDDFSAAM
GAEGIRALLNSMDILSEIESLRLEIQTTGSETKIKKAAKRLKVLEAFNKSGMKPEWMILT
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPEIIIRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKKMALELFKPFIFNKLEVMGVASTIKAAKREVENENPIVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEC
RTLMLSTNNVLSPANGDPIIVPSQDIVLGLYYMTREKVGAQGEGMVFSDVSEITRAYESK
ALELNARITVRIKEKKKSCGHGEDPIETITRFETTVGRALISEILPAGLPFALVNKTLKK
KEISKLINASFRLCGLRETVIFADKLMYSGFSYATRGGISICLDDLVTPSQKTGIIQAAE
QEIHEIANQYISGLVTQGERYNKVVDIWARAGDQVAKAMMDQLSVEPVKDQETGEIRTDK
NGQAVTQESFNSIYMMADSGARGSAAQIRQLSGMRGLMAKPDGSIIETPITANFREGLNI
LQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVIIENDCGTDGGVVMKALVEGG
NVVESLRGRILGRVAATDVINPETGEVICSEGTLLDEDTADEIEACSVDEVKVRTPLTCE
TRYGLCAKCYGRDLGRGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAVVANQ
AESKSNGVVRYSHHIRYVKNAQNELIIISRSGEILIQDENGRERERHKIPYGATLHVQDG
ETIKAGQILGSWEPHKRPIITEYAGKIRFENVEEGVTVVRQIDEITGMATLVVIDPKRRN
IAQSKGLRPLVKFLDENDQEINIPGTDQPVSITFHVGSIITVRDGQQVGIGEVLARIPQE
TSKTRDITGGLPRVAELFEARVPKDAGFLAEATGTVAFGKDTKGKQRLVITDLDGIAHEY
LIPKDKHVTAHDGQVVNKGEVIVDGPIDPHDILRLQGVEALAKYISDEVQDVYRLQGVSI
NDKHIEVIVRQMLRRVQITNAGDSAFILGEQVERAEVLAENEKLITENKMPATYEYVLLG
ITKASLSTDSFISAASFQETTRVLTEASIMGKKDDLRGLKENVIVGRLIPAGTGLSFHNI
RKKQRLSESTVYLDADLTENEIAE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcactgcttgatttattcaaacaagttacacagaaagaagaattcgattccata
aaaataggcttggcttctcctgagaaaattagatcatggtcatatggagaggtaaaaaaa
cctgaaacgataaattaccggaccttcaagcctgaaagagacggtttattttgtgccaaa
atatttggcccggttaaggattatgaatgcttgtgtggcaaatataagcgacttaaacac
cggggtgtgatatgcgaaaaatgtggtgtggaggtcaccttatccagaatcagacgggag
cgcatgggccatattgaactggcttcgcctgttgcccatatatggttcttaaaatcatta
ccttcacgcctgggtcttgtgctcgatataacgttacgagatatagagcgggttctgtat
tttgaggcctatatcgttactgatccaggtatgacaccactgactcgtggtcagcttctg
actgaagatgactatctgaataaaacagaagaatttggggatgattttagtgctgcaatg
ggggcagaaggtattcgtgcgctgttgaatagtatggacatcctgtcggaaatagagtct
ttacgtcttgagatccaaacgacaggctctgaaactaagattaagaaggctgccaagcga
ctcaaggtgcttgaggcgtttaataaatccggcatgaagccggagtggatgatattgacg
gtattgccagttctgcctccagagctaaggccattggttccattggatggtggccgtttt
gcaacttctgatcttaatgatttatacaggcgcgttataaatcgcaataatcgtttgaag
cggttgctggaattgcgggcaccggaaattattatccgtaatgagaagcgcatgctgcag
gaatcggtggattcattgcttgataacggccgccggggtaaagcaatgacgggagcaaat
aagcgaccgttaaaatcacttgcggatatgatcaagggtaaggggggacgtttccgtcaa
aacctgctgggtaagcgtgttgactattccggtcgctctgtaattgtggtagggccgcaa
ctcaagcttcatcagtgtggcttaccgaaaaaaatggcattggaattattcaaaccgttt
atttttaataagctggaagtaatgggagtggcgagcacgattaaagcggccaagagggaa
gtagagaacgaaaatccgattgtttgggatattctggaagaagttatccgtgaacatccg
gtaatgcttaaccgggcaccaactttacatcgactcggtatccaggcttttgaacctgtt
ctgattgaaggaaaggcaattcagttgcatccgcttgtatgtgctgcttttaatgcggac
tttgacggtgatcagatggcggtgcatgttcctttgtcgcttgaagctcagatggaatgc
cgtacgctgatgttatcaactaataacgttctttccccagctaatggcgatccaatcata
gttccttcccaggatatcgtgctaggtctttattatatgacgcgcgaaaaagttggggcg
caaggggagggaatggttttttcagatgtttcggaaataacgcgtgcttatgagagcaaa
gcgttggagctgaatgccagaatcaccgtaagaatcaaggaaaagaaaaaatcttgtgga
catggtgaagatccgattgaaacgattacacgttttgaaactaccgttggcagggcgctc
atatctgaaatcttgccagcaggacttcctttcgccctagtcaacaaaacgcttaagaaa
aaggaaatttccaagcttataaatgctagcttccgtttgtgtggtttgcgggagaccgtt
atatttgctgataaacttatgtattcgggtttttcctatgcgactcgaggtggaatttcc
atatgcctggatgatcttgttacgccatcacagaagaccggtattattcaggcagctgag
caagaaatacatgaaatagcaaatcaatatatttccggcttagttactcaaggagagcgt
tataacaaggtggttgatatctgggctcgtgcaggtgatcaggtggctaaagcaatgatg
gatcagcttagtgtcgaaccggtcaaagatcaagagacgggtgaaatcaggacagataaa
aatgggcaggcagttacgcaggaatcattcaattcaatttacatgatggctgattcagga
gcccgaggttctgccgcgcagatccgtcaactttcaggcatgcgtggtcttatggcaaaa
cctgatggctctattatcgaaaccccgattacagccaatttccgtgagggacttaatatc
ctgcagtattttatttcgacacacggtgccaggaaggggctggcagatacagcacttaaa
actgctaactcaggatatctcacacgtaggctggttgatgtgacccaggatctggttatc
atagaaaatgactgtggtacggatggtggtgtcgtaatgaaggctttggtagagggtggt
aacgttgttgaatccttgcgtgggcgaatcttagggcgagtagcggcgactgatgttata
aatccagaaaccggtgaggttatttgctcggaaggtacattgctggatgaagatacagcc
gatgaaattgaagcttgtagtgttgatgaagtaaaggtaaggacgccactcacttgtgaa
actcgatatggactttgtgcgaaatgctatgggcgtgacctggggcgtggaacgccagtt
aatgttggagaagccgtgggagtgattgcagctcagtctattggtgaaccgggtacgcag
ctaaccatgcggacttttcatattggtggtgcggcttcaagagcagttgttgccaatcag
gccgagagcaaatcaaacggagttgtccgttattctcatcatattcgctatgtaaagaat
gcacagaatgaactaattataatttctcgtagtggcgaaatcctgatccaggatgagaac
ggtcgtgaacgtgagcggcataaaattccttatggtgcgacgttgcatgtgcaagatggc
gaaacaatcaaggcagggcaaatcctgggctcatgggagcctcataaacgtcctatcata
acggaatatgccggcaagatacggtttgagaacgttgaagaaggcgtaacagttgtcaga
caaattgatgaaataaccgggatggccactctggtagttatagaccccaagcggcgaaat
attgcgcaatccaaaggattacggccgcttgttaagtttttggatgaaaatgatcaggaa
atcaatatcccagggactgatcaacctgtcagcattacattccacgttggttctattata
acggtacgagatggacaacaggttggtattggtgaggttctggctcgtattccccaggag
acatccaagactcgtgatattaccggggggctgcctagagtggctgagttgtttgaagcg
agagtgcccaaagatgctggtttccttgctgaagctaccggcacggtagcttttgggaaa
gataccaaagggaaacagcgtcttgttatcactgatctggatggtattgcacatgaatat
ctgattcctaaggataagcatgtgactgcgcatgatggtcaagtggtaaataagggtgag
gtgatcgttgatgggcctatcgaccctcatgatatattgcgactgcagggtgttgaggca
ttggcgaaatatattagcgatgaggttcaagatgtctatcgcctacaaggtgtaagcatc
aacgataagcatatcgaagtaattgttaggcagatgttgcgccgtgtccagataacaaat
gcaggtgactcagcttttattcttggagagcaggtcgagcgtgctgaggttcttgccgag
aacgaaaaactcattactgaaaacaagatgccggcgacctatgagtatgtgttactgggg
ataaccaaggcatctctttctactgactcgtttatttctgctgcttctttccaggaaaca
actcgtgtcttgaccgaagcgtctatcatgggtaaaaaagatgatttgcgaggtttgaag
gaaaatgtaattgtaggcagattaataccagcagggacgggcttgtcctttcataatatt
cggaaaaaacaaagattatcggaaagtactgtctatctggatgctgacttgacggagaac
gaaattgccgagtga
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integrated database retrieval system
