Nitrosomonas eutropha: Neut_1795
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Entry
Neut_1795 CDS
T00393
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
net
Nitrosomonas eutropha
Pathway
net03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
net00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Neut_1795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
net03021
]
Neut_1795
03400 DNA repair and recombination proteins [BR:
net03400
]
Neut_1795
Enzymes [BR:
net01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Neut_1795
Transcription machinery [BR:
net03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Neut_1795
DNA repair and recombination proteins [BR:
net03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Neut_1795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ABI60029
UniProt:
Q0AF53
LinkDB
All DBs
Position
complement(1903688..1907767)
Genome browser
AA seq
1359 aa
AA seq
DB search
MSYSFAEKKRIRKSFAKRTSILPFPFLLATQIESYADFLQADVAPGKRKNQGLQAAFNAV
FPIESHSNNARLDFISYMLGTSVFDVKECQQRGLTYASPLRARVRLTIMDKEASKPTVKE
VKEQEVYMGEIPLMTETGSFVVNGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDYVYFRIDRRRKMPVTTLLKAMGYSSTQILADFFEFDHFTLAGNK
ILFHLIPERLRGELASFDIVSEDGKVFVQKDKRITAKHVRDLQQANLTKISVPEEFLLGK
ILAEDIVDKETGEVVATANSEINETLLERIKQTQNKNSEISTLFVNDLNYGPYISQTLRV
DESTDQMSAQVAIYRMMRPGEPPTEDAVLALFNGLFYSPERYDLSVVGRMKFNRRVGREE
LTGSTTLSNEDITDVIKILVGLRNGRGEIDDIDHLGNRRVRSVGELAENQFRAGLARVEK
AVKERLSQAESENLMPHDFINAKPVSSAIREFFGSSQLSQFMDQTNPLSEITHKRRISAL
GPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARTNEYGFIETPYRM
VKNSRVTEEVVYLSAIEESQYVIAQANANFDQTGVFTDEVVSCRHKNEFTLASRDQIEYV
DIAPAQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRAEKPLVGTGIERVVAVHSG
TAVKALRGGVVDYVDAGRIVIRVHDAETRAGEVGVDIYNLTKYIRSNQNTNINQRPIVKI
GDILSREDVIADGASTDLGELALGQNMLIAFMPWNGLNFEDSILISERVVSDDRFTSIHI
EELTAVSRDTKLGTEEVTADIPNLSERQRARLDESGIVYIGAEVEAGDVLVGKVTPKSET
QLTPEEKLLRAIFGEKASDVKDTSLHVPAGISGTVIDVQIFTREGVDRDKRSKQIIADEL
GRFKKDLADQMRIVEADAFQRAKRLLAGKVAAGGPKKLAKNSTITQEYLESVEKHHWFDI
RLIDENTSLQLEQIKDSLVQKRKLFDLAFEEKQRKLSQGDELPPGVQKMVKVYIAVKRRL
QSGDKMAGRHGNKGVISKIVPVEDMPYMADGTPVDVVLNPLGVPSRMNIGQVLEVHLGWA
AKGLGKKINEMLISQRDASEIRDFLSKIYSDNGKQEDLVSLDDKEILELAKNLSDGVPFA
TPVFDGAHESEIKHMLKLADLPESGQTTLYDGRTGEAFDRLVTVGYMHVLKLHHLVDDKM
HARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTK
VYESIVKGDHKIDAGMPESFNVLVKEIRSLGLDIDLEQH
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgagttattcgtttgccgagaaaaaacgtatccggaaaagttttgctaaacgtaccagc
attctaccatttccgtttcttcttgccacccagatagaatcttacgctgattttttgcaa
gcagatgtggcgcctggtaaacggaagaatcaggggctgcaggcagcatttaatgctgtt
tttccaatagaaagccactctaataacgctcgtcttgattttataagttatatgcttggc
acatctgtgtttgatgttaaggaatgccaacagagagggttgacttatgcttctccactg
cgcgccagagtcaggctgactattatggataaagaagcttcaaaaccaactgtcaaagaa
gttaaagagcaggaagtttacatgggagaaattcctctcatgacagagactggttctttt
gttgttaatggtacggagcgtgttattgtttcacagctgcatcgttcaccaggggtattt
tttgagcatgaccgcggcaaaacacattcatccggtaagttgttattttctgcccgtatt
attccataccgtggttcttggctggattttgaatttgatcccaaggattatgtctacttt
aggatagatcgccgccgcaaaatgccggttacaactttgctaaaggcaatgggctattct
tccacgcagattcttgctgattttttcgagtttgatcactttacacttgcgggtaataag
attttatttcacctcataccggagcgtttgcgtggggagttggctagctttgatatcgtt
tctgaagatggcaaggtttttgtacaaaaagataagcggataacggcaaaacacgttcgt
gatctgcaacaggctaaccttactaaaatttctgtccctgaagaatttttattagggaaa
attttggctgaagacatcgtagataaggaaacgggggaggttgttgccacagccaatagc
gaaattaatgaaaccttacttgaacgaattaagcagactcaaaataaaaatagtgagatt
agtactctttttgtgaatgacctcaattacggcccttatatttcacaaacgttgagggtt
gatgaaagtactgatcaaatgtctgctcaggttgctatttacagaatgatgcgacctggt
gagcctccgactgaagatgctgtactagctttattcaatggccttttctattccccggag
cgttatgatttatctgtcgttggtcggatgaaattcaatcggcgggtggggcgtgaagaa
ctaacaggctctacgaccttatcaaatgaagatattactgatgttatcaaaatactggtt
gggttgcgaaatggtagaggcgagattgatgatatcgaccacttgggtaatcgtcgtgtt
cgttcggtaggtgaattagcagaaaatcaatttagagcaggtttagctcgagttgagaaa
gcggttaaggagcgtttgagtcaggctgaatcagaaaatctgatgccgcacgactttatc
aatgctaaaccggtgtcttctgctatacgtgagtttttcggatcaagtcaactatcacag
tttatggatcagactaatccattatccgaaattacacataaaaggcgtatatcagcatta
gggcctggcgggttgacgcgggagcgtgcgggttttgaagtgcgtgatgtgcatccaact
cattatggacgtgtgtgtccgattgaaactccggaaggaccaaatattggtttgattaat
tcgttggctctttatgctagaaccaatgaatatggattcatagaaaccccataccgcatg
gttaagaatagtcgtgtaacggaggaggtcgtatatctttcagctatcgaagaaagtcag
tatgtcattgcacaggcaaacgcaaattttgatcagaccggggtcttcactgatgaagtt
gtttcttgccgccataaaaatgaatttaccctggcgtccagagaccagattgagtatgtt
gatattgcgccagcccagattgtttctgtggcggcttcactgattccttttttggagcat
gatgacgcgaatcgcgcgttgatgggatcaaacatgcagcgacaggcggttccgtgttta
cgtgccgagaaacctttagtaggcacagggattgaacgagtggttgctgtacattcagga
actgcggttaaggcgttaagaggcggagtggtagattatgtggatgcagggcgtatagtg
atacgtgtgcatgatgcagagactcgtgccggggaagttggggtggatatttacaacctc
accaaatacatccgttcaaaccagaatactaatatcaatcaaaggcctattgtaaaaatt
ggtgatattctttctcgtgaggatgtaattgcagatggtgcatcgactgatctgggtgaa
ctggctcttggccagaatatgttaatagcatttatgccctggaatggactcaattttgaa
gattctattttgatatctgagcgagttgtatcagatgacagatttacttcaatacatatt
gaggaattaacagccgtcagtcgcgatacaaagcttggtactgaagaggtgaccgcagat
ataccaaatttatccgagcgtcaacgtgcgcgtcttgatgagtcaggaatagtttatata
ggcgctgaagttgaagccggggatgtgttggtgggtaaggttacacctaaaagcgaaaca
caattaacacctgaagagaaactgcttcgtgcgatattcggagaaaaggcatcagatgtt
aaagatacctccttgcatgtgccagcaggtatttcagggactgtaatagatgtacagatc
tttacgcgggaaggagttgatcgagataaacgttccaaacagataatagcggatgaattg
gggcgctttaaaaaagatcttgcagatcaaatgcgtattgttgaggcagatgcttttcag
cgtgcaaaacgattacttgcaggtaaagttgctgctggagggcctaaaaaattggcaaaa
aattcaactatcacacaagaatatctcgaaagtgtggaaaaacatcactggtttgatatt
cgtctgattgatgaaaatacaagccttcaactggagcagattaaagatagcctggttcag
aaaagaaagctgtttgaccttgcctttgaagaaaagcagaggaagctttcccaaggggat
gagctgccgcccggtgttcagaaaatggtgaaggtttatatcgcggttaaacggagactg
caatccggtgacaagatggctggccgacacggaaacaaaggagtcatttcaaaaattgtt
cccgtggaagatatgccctatatggcggacggcacaccagttgatgttgtactgaatcca
ttgggtgttccttcgcgtatgaatattggtcaagtacttgaagtgcacttgggttgggct
gctaaagggctcggcaagaaaattaacgagatgctgatctctcaacgtgatgcgtctgaa
atccgggattttttaagtaaaatctatagcgataacggaaaacaggaagatttggtttct
ctggatgataaagaaatactggaattggcaaaaaatctgtcagatggagttccttttgcc
acccctgtttttgatggtgctcatgaatccgagatcaaacatatgttgaaattggcagac
ctgccggaatccgggcaaactacgctctacgatggccggacaggggaagcttttgatcgc
ttggttaccgtaggttatatgcatgtactaaaacttcatcatctggtagatgacaagatg
catgctcgttcaacaggcccttacagtcttgtcacgcaacagccattaggtggcaaggcg
caattcggggggcagcggtttggtgaaatggaagtctgggctttggaagcatatggcgca
gcttatacccttcaggaaatgcttactgtgaaatctgatgacgtcaatggacgaactaag
gtttatgagagtattgtcaagggggatcataaaattgatgcaggtatgccagaatcattc
aatgtactagttaaagaaatcagatctctggggttggatatcgacctagaacagcattaa
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integrated database retrieval system
