Nitrosomonas eutropha: Neut_2157
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Entry
Neut_2157 CDS
T00393
Name
(GenBank) 3' exoribonuclease
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
net
Nitrosomonas eutropha
Pathway
net03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
net00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Neut_2157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
net03019
]
Neut_2157
03016 Transfer RNA biogenesis [BR:
net03016
]
Neut_2157
Enzymes [BR:
net01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Neut_2157
Messenger RNA biogenesis [BR:
net03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Neut_2157
Transfer RNA biogenesis [BR:
net03016
]
Prokaryotic type
tRNA degradation factors
Neut_2157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_SLS1_2
DUF6508
NuiA_2
MSC
Motif
Other DBs
NCBI-ProteinID:
ABI60379
UniProt:
Q0AE53
LinkDB
All DBs
Position
2282692..2284809
Genome browser
AA seq
705 aa
AA seq
DB search
MKPIKKSITYGHHTLTIETGEIAKQAHGAVMVSMDDTVVLVTVVGDKKTKPGQDFFPLTV
DYQEKFYSAGRIPGSFFKREGRPSEKEILTSRLIDRPIRPLFPDGFYNEVQVIAMVLSSD
AEIDADIPATIGASAALILSGIPFDGPIGAARVGYIDNEYVLNPTTTQLNKSQLNLVVAG
TQKAVLMVESEANELSEDVMLGAVTYGHDQMQQVINMINELADETGVTAWDWQPAEKDHS
LIEKITQLAEADLRDAFRLKQKSVRTEAISEIWQRVFTELKAGTEEGPSEQTIKEIGFAL
EAKIVRNSILDGESRIDGRGTRTVRPITIRHGVLPRTHGSALFTRGETQALVVTTLGTAR
DEQKIDALQGDYSERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALLAVLPPVEE
FGYAMRVVSEVTESNGSSSMASVCGGCLALMDAGAPLKAHVAGIAMGLIKEGNRFAVLTD
ILGDEDHLGDMDFKVAGTEEGITALQMDIKIQGITKEIMQVALLQAKEGRLHILDIMKQS
LPIARDSVSVHAPRIIKFKINPEKIRDVIGKGGAVIRALTEETGTTIDISDDGSVTIASI
SNEGGEQAKRRIENITADVEVGKIYEGTVLKLLDFGAIVSILPGKDGLLHISQIANERVE
SVADHLKEGQIIRVKVLEADDKGRLRLSMKAASTEAAATPENGEK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccgataaaaaaaagcataacttacggacaccatacgctcaccattgaaactgga
gaaattgcgaaacaggcacatggtgctgtcatggtttccatggatgacacggttgtgctg
gttacagtagtaggagataaaaaaaccaaacctggacaggattttttcccgctcacagtt
gattatcaggaaaaattttattctgccgggcgcattccaggaagcttctttaaacgtgaa
ggtcgtccttctgaaaaggaaatactaacatcccggctgattgatcggccgatacgtccg
ctcttccccgatggtttttacaatgaggtacaagtcatcgcaatggtattgtcatcagat
gctgaaatcgatgctgacattcctgcaacgatcggcgcatctgcggcactgatactctcc
ggtatcccatttgatgggcctatcggtgcagcacgcgtaggttatattgacaacgaatat
gtccttaatccgaccactacccagctcaataaatcgcaactcaatctcgtagtggcaggc
acccaaaaagctgtgctgatggttgagtcagaagctaatgaactctccgaagatgtcatg
ctcggagcagtaacctatggccatgatcaaatgcagcaggtaatcaacatgatcaatgaa
ctggctgatgagactggtgtaaccgcatgggattggcaaccggcagaaaaagatcattca
ctgattgaaaaaattactcaactggctgaagcggatttgcgcgatgcattccggctgaaa
caaaaatcggtcagaacagaagcaattagtgaaatctggcaacgtgtatttaccgaattg
aaagcaggtactgaggaaggccccagtgagcaaacgatcaaggaaatcggttttgcgctt
gaagccaaaattgtgcgtaacagcatccttgatggtgaatcccgcattgacggccgcgga
acacgtacagttagaccaattaccattcgccatggcgtattaccacgtactcatggttca
gcactgttcacacgaggtgagacgcaggctttggtagtgaccacactgggaactgcccga
gatgagcagaaaattgatgcactccaaggggattattccgaacgtttcatgctgcattac
aacatgcctccttttgccacgggtgaaaccggaagagtgggatcacccaagcggcgtgaa
attggccacggacgattggccaagcgtgctctgcttgctgtcctgccgccagtggaagaa
ttcggctatgcgatgcgggtagtctctgaagttacggaatcaaatggttcaagttcgatg
gcttctgtctgcggaggttgtcttgcactgatggatgcgggagctcccctgaaagctcat
gtcgctggtattgctatggggctgatcaaggaaggcaatcgatttgccgtactgactgat
atccttggtgatgaagatcatctgggcgatatggattttaaggtcgcagggactgaagag
ggtatcactgcattacaaatggatataaaaatccagggaatcacgaaagaaatcatgcag
gtagccttacttcaagcaaaagaagggcgactccatattctggatatcatgaaacaatct
ctcccaatagcaagagatagcgtatcggttcacgcaccacgtattatcaaattcaaaatt
aatcctgaaaaaatacgtgatgtgatcggtaaaggcggggcagttattcgcgcactgacc
gaggaaaccggaaccactatcgatatctccgatgatggttctgtgacaattgccagcatc
agcaatgaaggtggggaacaggcgaaaagacgtatcgaaaatattactgcagatgttgag
gttggcaagatttatgagggaacagtactcaaattgcttgatttcggtgctattgtcagc
attcttcctggaaaagatggtctgctccatatctcgcaaattgccaatgaacgagtcgaa
agcgttgctgaccacctcaaggaaggccagattattcgggtcaaagtactggaagcagac
gataaaggtcggttacgactcagcatgaaggcagccagcacagaagcagcagccactcct
gaaaacggtgaaaaataa
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