Nitrosomonas europaea: NE0172
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Entry
NE0172 CDS
T00130
Symbol
pnp
Name
(GenBank) pnp; polyribonucleotide nucleotidyltransferase protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
neu
Nitrosomonas europaea
Pathway
neu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NE0172 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
neu03019
]
NE0172 (pnp)
03016 Transfer RNA biogenesis [BR:
neu03016
]
NE0172 (pnp)
Enzymes [BR:
neu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NE0172 (pnp)
Messenger RNA biogenesis [BR:
neu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NE0172 (pnp)
Transfer RNA biogenesis [BR:
neu03016
]
Prokaryotic type
tRNA degradation factors
NE0172 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
NuiA_2
KH-I_KHDC4-BBP
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
CAD84083
UniProt:
Q82XT0
LinkDB
All DBs
Position
complement(210838..212964)
Genome browser
AA seq
708 aa
AA seq
DB search
MKPIKKSITYGRHTLTIETGEIAKQAHGAVIVSMDDTVVLVTAVGDKKTKPGQDFFPLTV
DYQEKFYSAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPDGFYNEVQVVAMVLSSD
TEIDADIPAMIGTSAALILSGIPFDGPVGAARVGYINNEYILNPTTTQLKESQLNLVVAG
TQKAVLMVESEADELSEDVMLGAVTYGHDQMQQVIDMINELADEAGVTAWDWQPAEQDLS
LVEKVTQLAEADLRNAFRLKQKSARVEAINEIWQRVFTELKVGTEEGPSEQAVREIGFAL
EARIVRNSILDGESRIDGRGTRTVRPITIRHGVLPRTHGSALFTRGETQALAITTLGTAR
DEQKIDALQGDYSERFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALLAVIPPVEE
FGYSMRVVSEVTESNGSSSMASVCGGCLSLMDAGVPLKAHVAGIAMGLIKEGNRFAVLTD
ILGDEDHLGDMDFKVAGTEHGITALQMDIKIQGITKEIMQVALLQAKEGRLHILEIMKQS
LPIARESISVHAPRIIKFKINPEKIRDVIGKGGAVIRALTEETGTTIDISDDGSVTIACV
SSEGGEQARKRIEDITADVEVGRIYEGTVLKLLDFGAIVSVLPGKDGLLHISQIANERVE
NVADHLKEGQTVRVKVLEADEKGRLRLSMKAASISTEITADNPDNTEK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccaataaaaaaaagtataacctacggacgccatacactcaccattgaaaccgga
gaaattgccaaacaggcacatggtgcagtcattgtttccatggatgatacggttgtactg
gtgactgcagtaggcgataaaaaaaccaaacccggacaggatttcttcccgctcaccgta
gattaccaggagaagttttattctgccggccgtattccaggaagttttttcaaacgtgaa
ggccgcccttccgaaaaggaaacactgacctcccggctgatcgatcgaccgatacgcccg
cttttccccgatggcttttataacgaagtacaagtcgttgccatggtgctgtcatccgat
actgaaatcgatgctgacattcctgcaatgatcggtacctcagcagcgctgatactctcg
ggtatccctttcgatggtccggtcggtgcagcgcgggtgggttatatcaataatgaatat
attctcaatccgaccactacccagctcaaggaatctcaactcaatcttgtggtagccggc
acgcagaaagcggtgctgatggttgaatcggaagccgatgagctttctgaagatgtcatg
ctcggtgctgtgacatacgggcatgatcagatgcagcaagtgatcgacatgatcaatgaa
ctggctgatgaagcaggtgtaactgcctgggattggcagccggcagaacaggatttatca
ctggtcgaaaaagttacccaactggctgaagctgatctgcgcaatgcattccggctgaaa
caaaaatcagccagagtcgaagcaatcaatgagatctggcagcgtgtattcaccgagttg
aaagtgggtacagaggaaggccccagtgaacaggcagtcagagaaattggttttgcgctt
gaagccagaatagtacgtaacagtattcttgatggggaatcccggatcgatggtcgtggc
acccgcaccgttcggccaatcactattcgccatggtgtattgccgcgcactcacggttct
gcgctgttcacacggggagaaacacaagcacttgcaatcaccacgctgggaacagcacgc
gatgaacaaaaaatagacgcactccagggagattattccgaacgtttcatgcttcactac
aacatgcctcctttcgccacgggcgaaaccggaagggtaggaacccccaaacggcgtgaa
atcggtcatggacggctggccaagcgtgctctgctggcagtgataccaccagtggaagaa
ttcggttattcgatgcgcgtggtctcggaagtgactgaatcaaacggctccagctcgatg
gcatctgtctgtggtggatgtctttcactcatggatgcaggtgttccactgaaagcacat
gtagccggcatcgccatgggattgatcaaggaaggcaaccggtttgccgtgctgaccgac
attctcggcgacgaagatcacctgggtgatatggatttcaaggtggcgggtaccgaacac
ggcatcactgccctgcaaatggatataaaaattcaggggatcacgaaggaaatcatgcag
gttgctctgctccaggcaaaggaagggcgtctgcatattctggaaatcatgaaacaatct
cttccaattgcaagagaaagtatctcggtccatgctccgcgcatcatcaaattcaagatc
aacccggaaaagatccgtgatgtcatcggtaaaggcggtgcagtgattcgtgcgctaacc
gaagaaaccggaacgaccatcgatatttccgatgatggttccgtgacgattgcctgtgtc
agcagtgaaggtggagaacaagcgagaaaacgtatcgaagatatcactgcagatgtcgaa
gtcggaaggatttacgaaggaactgttctcaaattgcttgattttggcgccattgtcagc
gttcttccggggaaagatggattgctccatatttcccagattgccaatgaacgggtcgaa
aatgttgctgaccatctcaaagaaggacagaccgttcgtgtcaaagtactggaagcagat
gaaaaaggccggctgcgactcagtatgaaagcagccagtatcagcacagaaataactgca
gacaatccggacaacactgaaaaataa
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