Nitrosomonas europaea: NE0426
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Entry
NE0426 CDS
T00130
Symbol
rpoA
Name
(GenBank) Bacterial RNA polymerase, alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
neu
Nitrosomonas europaea
Pathway
neu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NE0426 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
neu03021
]
NE0426 (rpoA)
03400 DNA repair and recombination proteins [BR:
neu03400
]
NE0426 (rpoA)
Enzymes [BR:
neu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NE0426 (rpoA)
Transcription machinery [BR:
neu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NE0426 (rpoA)
DNA repair and recombination proteins [BR:
neu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NE0426 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HEPN-like_int
Motif
Other DBs
NCBI-ProteinID:
CAD84337
UniProt:
Q82X69
LinkDB
All DBs
Position
465678..466688
Genome browser
AA seq
336 aa
AA seq
DB search
MSSNSFLTPRIVEVHNISPLHAKVVMEPFEHGFGYTLGNALRRVLLSSIPGCAPTKVSIS
GVVHEYSTIDGLQEDVVDLILNLKGVVLKLHNNKTQSVLTLKKSSEGIVTAGDIEATHDV
EIVNPDHVIAHITSGGKIEAQITVEKGRGYWPSANRSKEDKSSSSIGDILLDASFSPIRR
VSYAVESARVEQRTDLDKLIIDIETNGSVDPEEAIRYAAKVLVEQFSFFADLESTPLPTE
QPKAPVIDPILLRPVDDLELTVRSANCLKVENIFYIGDLIQRTEAELLRTPNLGRKSLNE
IKEVLASRDLSLGMKLENWPPANLENYIKEPGHASS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaatagttttctgacacctaggattgtagaggtacataatatttcacctttg
catgcgaaggtcgtaatggagccttttgagcatggttttggctatactttgggtaatgcg
ttgcgaagagtattgctatcttccattcctggttgtgcaccaaccaaagtcagcattagc
ggagtagttcatgaatattcaacaatagatggtttacaagaggatgttgttgatctgata
ctgaacttgaaaggggtggttcttaaacttcacaataataagactcagtcagttcttacc
ctgaagaaaagttcggaaggtattgtcacagcgggtgatattgaagctactcatgatgta
gaaatagtaaaccctgatcatgtgattgctcatattaccagtggcggtaaaattgaggct
caaattactgttgaaaaggggaggggttattggccttctgctaatcgcagtaaagaggat
aaaagttcttcttcgattggggatattctgttagatgcttctttcagtccgatcagacgt
gtaagttacgctgtggaaagtgctcgtgttgaacaaagaactgatctagataagctgatt
atcgacatagagacaaatggttcggtagatcctgaagaagcgatacggtatgcggccaag
gtcttggttgagcagttttctttcttcgcagaccttgaaagtacaccgctgccgacagaa
cagccaaaagcacctgtcatcgaccctatactattacgtccagttgatgatttggaactt
acagtacgttctgcaaactgtttgaaagtcgagaatattttttatattggtgatttgatt
caacgaactgaggcagagctacttcgtactcctaatttgggaaggaagtcacttaatgaa
attaaagaagttcttgcttctcgtgatttatccttgggtatgaaattagaaaattggcca
ccagctaatttggaaaactatataaaggaacccggtcatgcgtcatcgtaa
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