Nitrosomonas europaea: NE1172
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Entry
NE1172 CDS
T00130
Symbol
xseA
Name
(GenBank) xseA; exodeoxyribonuclease vII large subunit protein
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
neu
Nitrosomonas europaea
Pathway
neu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NE1172 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neu03400
]
NE1172 (xseA)
Enzymes [BR:
neu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NE1172 (xseA)
DNA repair and recombination proteins [BR:
neu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NE1172 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF5984
Motif
Other DBs
NCBI-ProteinID:
CAD85083
UniProt:
Q82VC2
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All DBs
Position
1272075..1273421
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AA seq
448 aa
AA seq
DB search
MTDHNLLPEPKKILWRVSELNRNARVILEQTFPLLWVSGEISNLKRYPSGHWYFSLKDDS
AQVRCVMFRHKNLYLDWIPQEGMQVEAQALVTLYEARGEFQLTVEQLRRAGLGALFEAFE
RLKARLQQEGLFSPEYKQPLPRFPRQIGIITSPNTAALRDVLTTLQLRLPSIPVVIYPAP
VQGEGSAAAITTALHTAAVRGECDVLILCRGGGSIEDLWAFNEEIVARAIAACPIPIVTG
IGHETDFTIADFVADARAPTPTGAAQLASPDRQAILHRLQYWLHRLQQTMERHIERRMQA
TDLLAHRLIHPGERIRHQQMHLLQLRGRLQNAWNRQVEIRTWRIEETGRRIHSAKPDIQA
GIRHQQELAARLQRAMAHRLENLQFKLRQQQQHLIHLDPKAVLARGYSIAYTARGDILHD
SRQTRAGDNVRLVFASGWAKADITETGE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcacaatctcttgcccgagccgaaaaaaatcctgtggcgtgtcagtgaatta
aaccgtaatgctcgtgtaatacttgaacagacttttccactgttatgggtaagcggggaa
atttccaacctgaaacgctatccatccgggcactggtatttttcactcaaggatgacagt
gcacaggtgcgctgcgtcatgttccgccataaaaatctgtatctggactggataccgcag
gagggtatgcaggttgaagcccaggcactggttacactgtatgaagcgcgtggagaattt
caactgactgtcgagcagttgcgccgtgccgggttgggggcactgttcgaggcattcgag
cgactcaaagccagactacagcaggaaggactattcagccccgagtacaagcaaccgtta
ccccgtttcccgcgacaaatcggaatcatcacctctcccaacaccgcagcattacgggat
gtactgacgaccttgcaactgcgtttaccttccattcccgtcgtgatctatcctgcacca
gtgcagggtgaaggatcagctgctgcaattaccaccgcactgcacactgctgcagtacgg
ggcgaatgcgatgtcctgatcctgtgtcggggaggcgggtcgatcgaagatttatgggca
tttaatgaagaaatcgtggcacgggccattgctgcctgcccgattccaatcgtaaccggt
atcggccatgaaaccgacttcaccattgccgattttgtggccgatgctcgtgcaccaact
cctactggtgctgctcaactggcttcacctgacagacaggcaattctgcatcgcctgcag
tactggctgcatcgcctgcaacagacgatggaacgccatatcgaacgccgcatgcaagcc
actgatctgcttgcccatcggctgattcatcccggtgaacgaatccgtcatcagcagatg
catttgttgcaattacgtggccgtctgcaaaatgcctggaaccggcaggttgaaatccgc
acatggcgaatcgaagaaaccggacgacgcatacactctgcaaagcccgatatccaggcc
ggcatcaggcatcagcaggaactggccgcacgactgcagcgcgcaatggcacaccggctg
gaaaatctgcaattcaagctgcgccagcaacagcagcacctgatccacctcgacccgaaa
gcggtactggcacgcggttacagtatcgcctatactgcccggggtgatattctgcatgac
agccggcaaacccgggcgggtgacaatgtgcgactggtttttgccagcggctgggccaaa
gcggatatcactgaaacaggcgaatga
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