Nitrosomonas europaea: NE1217
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Entry
NE1217 CDS
T00130
Name
(GenBank) putative sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
neu
Nitrosomonas europaea
Pathway
neu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NE1217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
neu03021
]
NE1217
Transcription machinery [BR:
neu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NE1217
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_23
MerR
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_17
ARMH5
Motif
Other DBs
NCBI-ProteinID:
CAD85128
UniProt:
Q82V82
LinkDB
All DBs
Position
1325996..1326508
Genome browser
AA seq
170 aa
AA seq
DB search
MCSTDSSKDIVPTADSAMQQVYFLYSDHHDWLYSWLRHRLGNAADAADLAHDAFLRLIIK
PAPRGFANFGEARAYLRTMAQGMCINLWHRREIERAWLDTLAAWPEALAPSPERQVMVLE
ALHEIGTMLLDLPPKAARAFLMAAACQMTDKEVAEALGVSSRMVRKYGFP
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcaaccgattcctccaaggatatcgtaccgactgccgattctgcgatgcagcag
gtttatttcctgtacagcgatcatcatgactggctgtacagctggttacgccaccggttg
ggtaacgctgctgacgcagccgatctggcacatgatgcttttctgcgccttattatcaaa
ccggctcctcgcggttttgccaattttggtgaagcacgcgcctacctgcgtaccatggct
cagggcatgtgcatcaacctgtggcaccgccgtgaaatcgaacgagcctggctggatacc
ctggctgcatggccggaggccctcgccccttctcccgagcgacaagtcatggtattggaa
gcgctgcatgaaatcggcactatgctgctcgatcttccgcctaaagctgcccgagctttc
ctcatggctgcagcttgccagatgacggacaaggaagtggctgaagcacttggcgtttca
tctcgcatggtacgcaagtatggattcccttga
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