Nitrosomonas europaea: NE1392
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Entry
NE1392 CDS
T00130
Symbol
sbcC
Name
(GenBank) ATP/GTP-binding site motif A (P-loop):ABC transporter
KO
K03546
DNA repair protein SbcC/Rad50
Organism
neu
Nitrosomonas europaea
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neu03400
]
NE1392 (sbcC)
DNA repair and recombination proteins [BR:
neu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NE1392 (sbcC)
Archaeal homologous recombinant proteins
NE1392 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND_NTPase5
Gly_acyl_tr_N
cobW
nSTAND3
ABC_tran
KH_PARP14_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAD85303
UniProt:
Q82UT3
LinkDB
All DBs
Position
1520301..1523564
Genome browser
AA seq
1087 aa
AA seq
DB search
MQILQVRLKNLNSLVGEWEIDFTDPAFVSDGIFSITGPTGAGKTTVLDAICLALYGRTPR
LGKVSKSENEIMSRQTGECFAEVTFAAQSGCFRCHWSQHRAHKKPDGELQNPRHELAEAD
SGKILETRLTEVGRQIEKITGMDFARFTRSMLLAQGEFAAFLQAAPDERAPILEQITGTE
IYSRISIRVHETRVSARRELDRLSAGLNGIQPLTRADEQQFHTDLAQKIQQDAGLNEQIA
HERQILVWLENIARLESELHLIAGQQQAWLSRKEALTPDISKLDSASRALELLGEYSRLT
SIRNEQETDRNNLAICAASLAGLEQAVKQAEQSLKSLNEQCDRQRAKQRETIPLLRKVRE
LDIQIREKESPISTASKGITAQKKTLAALRNQYQQNEIQLAGLQTTLAGLLQQLHVIQPD
GAQMDFAHNQNLLNRKQAEYRQLLENRSLADWRQEIAVLSGQKTLATRAIEAMQSLAASK
QISAELEKHTCSLLAGKTQLAKQLGAEEEMLGALEREISLLETQALLLKKISHLEEARQQ
LKDDEPCPLCGALQHPYAAGNTPRPDDNITALNQARTMLKTRIDTISTLKIRQAETNRDI
EQTACRQQEIHRQIQADETLLQQCAVSLFPGLPSAAMFPELPRLLQETDDKLARMTRILQ
TAEILENEISVQRESLDKTRELEQKIGILRVQHQHQSTQIRQHEAELQLRQEQLDQLQQE
LGNLRTTRLQLFADKQPDQEEQSLTTAIEAAQKSADNARQQLETEIQQYNRLKNRAEDLV
KTITTRAVQLEKLQETFAARLTQSGFADEAGFTAACLPEEERRRLAQRAQQLADEKTMLD
TRQKDKTIALQAEQLKSMTDQPRDFHDQVLAQLITRQQVLQQEIGGLRQKLADNENSKQK
QQEQLQVIEAQKRECARWDLLHGLIGSADGKKYRNFAQGLTFEVMIRHANRQLQKLSDRY
LLIRDPVRPLELNVIDNYQAGEIRSTKNLSGGESFLISLSLALGLSRMVSRNIRVDSLFL
DEGFGTLDEEALDTALETLAHLQQEGKLIGIISHVTVLQERISTRIQVIPRSGGRSVLAG
PGCRHCQ
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcagatattgcaggtacgcctcaagaatctgaattcactggtcggcgaatgggaaatc
gatttcaccgatcccgcttttgtatcggatggtattttttcgattaccggcccgaccggt
gcaggtaaaacgacggtgctcgatgcaatttgtctggcgctatatggacgtacccctcgc
ctcggaaaagtcagcaaaagtgaaaatgaaatcatgtcgcggcagacaggtgaatgcttt
gccgaagtaacttttgctgctcagtccggctgcttccggtgccactggagccagcaccgg
gcccacaaaaaaccggatggagaattacagaatccccggcatgagctggctgaagctgat
tccggaaagatactggaaacccggcttacagaagtcggcagacagattgagaaaatcacc
ggaatggattttgcccgcttcactcgctccatgttgctggcgcagggagaatttgctgca
ttcctgcaggcggcgccggatgaacgtgctccgattctggaacagatcaccggcactgaa
atatacagccgcatttccatccgtgtgcatgaaacccgggtatccgcacgccgggagctg
gatcggctatccgccggtctcaatggtatacaaccgctgaccagggccgatgaacaacag
tttcacactgatcttgcacaaaaaattcagcaggatgccggattgaatgagcagattgcg
cacgagcgacaaatccttgtctggctggagaacatcgcccgcctcgaatcggaattgcat
ctgatcgccggacaacagcaagcatggttaagccggaaagaagcgctgactcctgacatc
agcaagctcgacagcgccagccgtgcgctcgagctgcttggtgaatacagcagactcact
tcgatccggaatgaacaggaaactgaccggaataatctggctatctgcgctgcctccctg
gccgggcttgaacaggccgtcaaacaggccgaacaatccctgaaatccctcaatgaacaa
tgtgatcgccagcgggcaaaacagcgggaaaccatcccgctgctccgcaaagtacgggaa
ctggatattcagatccgggaaaaagaatctcccatcagcacggcaagcaaaggaattaca
gcacagaaaaaaacactcgctgctctgcgaaaccagtatcagcaaaatgaaatccagctt
gccggactgcaaacgacactggccggtttattacaacagctccacgtcattcagccggat
ggagcacaaatggattttgcacataaccaaaacctgttgaaccggaaacaggctgaatac
aggcaactgctcgaaaaccgaagcctggcagactggcgacaggaaatcgcggtactgtcc
gggcaaaaaacgcttgcaacccgggcgattgaagccatgcaatcactggctgcatcgaag
cagatttctgccgaactggaaaaacacacctgttcgctgctggccggaaaaacacagctt
gcgaagcaactcggagccgaggaagaaatgctgggcgcacttgagcgggaaatcagcctg
ctcgaaacacaggcgctgctgctcaaaaaaatcagccaccttgaagaggccagacaacag
ctgaaagatgatgagccctgcccgttgtgtggcgcgctgcaacatccttatgcagcagga
aataccccccggccggatgacaatatcacggcgctgaatcaggcaagaacgatgctgaaa
acccggatcgacactatctcgacattaaaaatcagacaagcggaaacaaacagggacatc
gaacagaccgcctgcagacagcaggaaatccacagacagattcaggcggatgaaacactg
ctgcagcaatgcgccgtatcattgttccccggcctgccatctgccgccatgtttccggaa
ctgcctcggttgctgcaggaaacagatgacaaactggcccgaatgacccgtattctgcaa
acagcagagatactggaaaacgaaatcagtgtgcagcgtgaatctctggataaaaccaga
gaacttgagcaaaaaatcgggatactgagggtgcagcaccagcatcagtccacacagatc
cggcaacacgaagcagaactgcaattgcgacaggaacaactcgatcagctccagcaggaa
cttggcaatctgcgcacaacacgccttcagttgtttgctgacaaacagcccgatcaggaa
gaacagtcattaaccaccgcaatagaggcagcacaaaaatcagcagataacgctcgtcag
cagttggaaacagaaatacaacagtacaaccgattgaaaaaccgggcagaagatctggta
aaaaccatcaccacccgcgccgtacagttagaaaagctgcaggaaacctttgctgcacgg
ctcactcaatccggatttgctgatgaagcgggctttaccgctgcctgtctgccggaagaa
gaacgcagacgccttgcacagcgcgctcaacagcttgcggatgagaaaaccatgctggat
acccggcaaaaagataaaacgattgcgttacaagctgaacaactgaagtccatgacagac
cagccccgggattttcacgaccaggtactggcacaactgatcacccgtcagcaggtacta
caacaggaaatcggcggactacggcaaaagcttgcagataacgaaaacagcaaacaaaaa
cagcaggaacagctgcaggtaatcgaggcacagaaacgggagtgtgcccgctgggatctg
ctgcatggcctcatcggctcagcagatggcaaaaaataccgcaactttgcccagggactg
actttcgaagtcatgatccgccacgccaaccggcagctgcaaaaactgtccgaccgttat
ctgctgatccgcgatccggtccggccgctggagctcaacgtcatcgacaactaccaggct
ggcgaaatccggtccaccaagaatctttcgggaggagaaagcttcctcatcagcctgtcg
ctggcgcttggcctttcccgcatggtgagccgcaacatccgggtcgattccctgtttctg
gatgaaggtttcggaacactggacgaggaagcgctcgatactgcgctggagacactcgcc
cacttgcagcaggaaggcaaactgatcgggatcatttcccatgttaccgtcctgcaggaa
cgcatcagcacccgcattcaggtcatcccccgatcaggcggaagaagtgtattagccggg
ccgggttgcaggcactgccaataa
DBGET
integrated database retrieval system
