Nitrosomonas europaea: NE1401
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Entry
NE1401 CDS
T00130
Symbol
ligT
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
neu
Nitrosomonas europaea
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
neu03016
]
NE1401 (ligT)
Enzymes [BR:
neu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NE1401 (ligT)
Transfer RNA biogenesis [BR:
neu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NE1401 (ligT)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
CAD85312
UniProt:
Q82US8
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All DBs
Position
complement(1530806..1531381)
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AA seq
191 aa
AA seq
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MSSVAPSVRLFFALWPQEAVRKQLARLARRIADQCAGRCVRPENLHLTLAFIGEVDSSVV
PILRQAGSAIHRTSFDLLLDKLHCWGKGSIIAAGVSQPCGELTVLVQDLRNQLSAAGVRY
DTVKFVPHVTLVRNAKREPEQKHFPETIPPVAWAADRWSLVQSRPTPYGSAYQSFADWAL
ASQDFDEHHRA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgtggctccctccgtcagactgtttttcgcgttgtggccgcaggaggcggtg
cgtaaacaactggcccggctggccagaaggattgcagatcagtgtgctggccggtgtgtg
cggccggagaacctgcatctgacactggcattcattggtgaagtggatagcagcgtggtc
ccgatattgcgccaggcaggctcagccatccaccgtacatcgttcgatctgttattggat
aaactgcactgttggggaaaaggcagcatcatcgctgctggagtttcacagccttgcggc
gaactgacagtactggtacaggatttgcgcaatcagctttctgctgctggcgttcgctat
gacacagtgaaattcgtaccgcatgtcacgctggtgcgaaatgccaaacgggaacccgag
cagaaacattttccggaaacgattccgcccgtcgcctgggcggcagatcgatggtcactg
gtgcaatcccggccaactccatacggatcggcctatcaatcgtttgcagattgggcgctc
gcatcacaggattttgatgaacatcatcgcgcttga
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