Nitrosomonas europaea: NE1625
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Entry
NE1625 CDS
T00130
Name
(GenBank) Ribonuclease II domain
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
neu
Nitrosomonas europaea
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
neu03016
]
NE1625
Enzymes [BR:
neu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NE1625
Transfer RNA biogenesis [BR:
neu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NE1625
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CAD85536
UniProt:
Q82U76
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All DBs
Position
1756638..1758497
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AA seq
619 aa
AA seq
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MVNVFYEEAGALKVGSILTDNTTSLQIESAHGKRSKIKAALVLLRFENPPMHGFMQQAQE
KAADIDVNFLWECCEENREFTGQELAGDYFGHTPDPLETAAILILLSQNPIYFHKKGVGR
FKAAPPEILQAALASREKKRLAEEKQAGYVQQLMAFELPDTFRPLLDDLLYKPDKNTIEW
KALETACDATRLSVPRLLERCGAIPSTHDYHYNQFLYEHFPEGIDTDAYPADFHLLDPED
LPVAGVKAFSIDDATTTEIDDAFSVTPLNFGSFRIGIHIATPALGVAPHSLLDKFAAKRL
STVYLPGRKITMLPESVIQHFTLGEAHHRPVLSLYLEVADDFTVTRTFSRIETIEVSTNL
RLDSLERQFNEITLRENQTDYPFAHELRLLWNFSCKMEKLRGKDQDINSEKIDYSFIIDQ
DRVSVYERRRGAPIDKVVSELMIFANAEWGKQLADAGYAGIYRSQGNGKVKMSLSPAPHQ
GLGVSQYAWSSSPMRRYVDLINQRQLIALVSGNPPPYTREDDTLLIAMRDFEMAYATYAE
FQRGMERYWCLRWLLQENISTSGAIVIKENMIKLDRLPLIVRIPSLPELAPGTLVAVGVS
QIDLIDRSLNASFLGKSEG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaacgttttttacgaggaagcaggtgcgctcaaggtcggcagcattctgaccgac
aatacgacctctctgcagatcgaatctgcacatggaaagcgctccaagatcaaggccgca
ttggttctgttacgcttcgagaacccgcccatgcatggattcatgcagcaggcgcaggaa
aaagcggccgacatcgacgtgaattttctatgggagtgctgcgaagagaaccgggaattc
accggacaggagctggctggtgattatttcggccacacgcctgatcctctcgaaactgcc
gccatcctgattctgctcagccagaatccgatttattttcataagaaaggagtggggcgt
ttcaaggcggccccgccggaaattctgcaggctgcgcttgccagccgtgaaaaaaaacga
ctggccgaggaaaaacaggccggttacgtgcagcaattgatggcattcgaactgcccgat
accttccggccgctgctcgatgacctgttgtacaaaccggacaaaaacacgatcgaatgg
aaagcactggaaaccgcgtgcgacgctacccggttgagcgtgcccaggctgctggaacga
tgcggtgccattccctcaacgcatgattaccactataaccagtttttgtacgaacacttc
ccggaaggtatcgacacagacgcataccctgccgactttcacctcttggacccggaagat
ttgccagtggccggcgtcaaggcattcagcatcgacgatgccaccacgactgaaatcgat
gatgccttttcagtcaccccgctgaacttcggcagcttccggatcggaatacacattgcc
acccctgctttgggagtggcaccgcactccctgctcgataaatttgcggcaaaacgcctg
tccaccgtctatctgcccggccgtaaaatcaccatgctgccggaaagcgtgatccagcac
tttacactgggagaagcacaccaccggccggtactctcgctctatctggaagttgcggat
gatttcaccgttactcgtaccttcagccggatcgaaaccatcgaggtttccaccaatctg
cgcctcgattcgcttgaacggcaattcaacgaaatcacgctgcgcgagaatcagacggat
tatccctttgcccatgagctgagattgctctggaatttctcctgcaaaatggaaaaattg
cgcggcaaggatcaggacatcaacagcgaaaagatcgactacagttttatcatcgatcag
gatcgtgtttcggtttacgaacgccgccggggagcgcccatcgataaagtggtatcggaa
ctgatgatttttgccaacgccgaatggggcaaacaactggcagatgccggttacgccggg
atttatcgcagccagggaaacggcaaggtgaaaatgagcctttcccccgcaccgcatcag
gggttgggcgtatcccaatacgcctggagcagttcacccatgcgacggtatgtcgatctc
atcaaccagcgccagttgatcgcgctggtatcgggcaatccacctccctatacccgcgag
gatgatacgctgctgatcgccatgcgcgattttgaaatggcgtatgcaacctatgcggaa
ttccagcgcggcatggaacgctactggtgcctgcgctggctgctgcaggaaaacatcagc
acatccggtgccatcgtcatcaaggaaaacatgatcaaactggaccgcctgccgctgatc
gtacgtataccctcgttacccgaactggcacccggcacattggtggccgtcggtgtctca
cagatcgacctgatcgatcgatcactcaatgccagctttcttggtaaaagtgaaggctga
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