Nitrosomonas europaea: NE1961
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Entry
NE1961 CDS
T00130
Symbol
ihfB
Name
(GenBank) Bacterial histone-like DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
neu
Nitrosomonas europaea
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
neu03032
]
NE1961 (ihfB)
03036 Chromosome and associated proteins [BR:
neu03036
]
NE1961 (ihfB)
03400 DNA repair and recombination proteins [BR:
neu03400
]
NE1961 (ihfB)
DNA replication proteins [BR:
neu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NE1961 (ihfB)
Chromosome and associated proteins [BR:
neu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NE1961 (ihfB)
DNA repair and recombination proteins [BR:
neu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NE1961 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
CAD85872
UniProt:
Q82TD7
LinkDB
All DBs
Position
complement(2116967..2117284)
Genome browser
AA seq
105 aa
AA seq
DB search
MTKSELISKLAERFPQLLAKDAELVVKIILDAMAKSLSRGERIEIRGFGSFDLNYRPSRV
GRNPKSGEKVHVPEKYVPHFKAGKKMRELIDSGPKQHKVLDRVTG
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtctgaactgatttccaagctggcagaacgctttcctcagttgctggcaaaa
gatgctgaactggtcgtcaagatcattctggatgcgatggccaagagtctttccagggga
gagcgtatcgagattcgtggatttggcagttttgacctgaattacagaccttcgcgtgtt
ggccgtaacccgaaatcgggtgagaaggttcatgttccggaaaaatacgttccacatttc
aaggcgggtaagaagatgcgtgaactgatagattccggccctaaacagcacaaagtgctc
gatcgcgttacgggttga
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integrated database retrieval system
