Nitrosomonas europaea: NE2235
Help
Entry
NE2235 CDS
T00130
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
neu
Nitrosomonas europaea
Pathway
neu00061
Fatty acid biosynthesis
neu00071
Fatty acid degradation
neu01100
Metabolic pathways
neu01212
Fatty acid metabolism
neu02024
Quorum sensing
neu04146
Peroxisome
Module
neu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NE2235
00071 Fatty acid degradation
NE2235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NE2235
09145 Cellular community - prokaryotes
02024 Quorum sensing
NE2235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
neu01004
]
NE2235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
neu04147
]
NE2235
Enzymes [BR:
neu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NE2235
Lipid biosynthesis proteins [BR:
neu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NE2235
Exosome [BR:
neu04147
]
Exosomal proteins
Exosomal proteins of breast milk
NE2235
Exosomal proteins of breast cancer cells
NE2235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
DUF3501
Motif
Other DBs
NCBI-ProteinID:
CAD86147
UniProt:
Q82SS2
LinkDB
All DBs
Position
complement(2422775..2424622)
Genome browser
AA seq
615 aa
AA seq
DB search
MIGKAGIGTILDLLRVRSAATPAATAFQVLVQNKSWQPTNWEQFVQAAGRVGARLTDFGV
RKGDHVGIMAATSLDWEYAQMGALFAGAVVAGIDPEYPADQLNHVIENLGLSVLFVQNRS
VFAKIPLELRQQISVFIFFEGESQQKNEFSMINLLVEQETDTSICLPDVLPQDEAVIVFS
SGTTGMPKAIIFTHEQVIMAVEAIMRVFNDLSSQTILLCWLPLSNLFQRIVNFCAIKIGA
SSYILSDPRDLMRYVKQVNPDVLIGVPKVLERVHSGVVDHIEGRVWPLRMLARWAIRIGY
KRAAARSDRGDSFGLMNKLLWKQAENMFLRRLRMVFGSRVRYLVSGSAAMPVWLLRWFDA
IGLPVYEVYGISENVIPVAVNSSGSRKLGAVGKPLLPNEIKLTMDGEILVRGPGVFKGYQ
DRKEESNLRFSPDGYWHTGDLGELDTAGFLSIVGRKSDVFKTSAGKWIAPVRIEERLGRI
AYVEQSVVFQYESGKIVAVIVVDLEKCAQKTSAVRYSEVSLHMENMAKNKLHQILETDIN
AELEDLPLYQRPVYVAVTDKFFTVSGGELTVNMKVRRSIVAQRFSAYFENTVCKSDQGRA
ENGHVVMSGPTIFFI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgataggtaaggctggaatcgggacgatacttgatctgctgagagtacgtagtgcagct
acacctgctgcaactgcatttcaggttttggttcagaataaaagttggcagccgaccaat
tgggagcagtttgtacaggccgcagggcgggttggtgcaaggttaacagattttggggtc
aggaaaggtgatcatgttggtatcatggctgcaacatcacttgactgggaatatgcccaa
atgggggcattgtttgcaggagccgttgttgctggaattgaccctgagtatccggcggac
cagttaaatcatgtgatcgagaatcttgggttgtcagtcctgtttgttcagaatcgttca
gtcttcgcaaaaattccattagaacttcgtcagcagatcagtgtatttattttctttgag
ggtgaatctcagcagaaaaatgaattcagcatgatcaatttactggtagagcaagaaact
gatacttctatttgtttgccggatgtgttgccacaggatgaggcagtgatcgtattttct
tctggtacaaccgggatgcccaaagcaattatctttacccatgaacaggttattatggcg
gttgaggccattatgcgggtatttaatgatttgagtagccagacgatacttttgtgctgg
ttgccgttatcgaacctttttcagcgtattgtcaatttttgtgcaataaaaattggtgca
tcgagttacatattgagtgatccgcgtgatttgatgcggtacgtcaaacaggtgaatcca
gatgttctgatcggtgtgccaaaggtacttgagcgagtgcattcgggggttgtcgaccat
attgaaggtcgggtttggccattgcgtatgctggcgcgatgggcaattaggataggttac
aagcgggctgcggcaaggagtgatcgaggtgattcttttggtctgatgaataaactgcta
tggaaacaggccgagaatatgtttttacgccgcctgcgaatggttttcggttcgcgggtt
cgttatctcgtcagtggatctgctgcgatgccggtttggctattgagatggtttgacgca
attggattaccggtatatgaagtttatggtattagtgagaatgttatccctgtcgcggta
aattcatctggcagccgtaaattgggggctgtgggtaaaccattattgccaaatgagata
aagctcactatggatggtgagatccttgttcgaggcccaggagtgttcaagggttatcag
gatagaaaggaagagagtaatttgcgtttttcaccagatggttattggcacactggtgat
ctgggagagctagatacagcaggatttctttctattgtcgggagaaagagcgatgttttc
aaaacatctgcaggaaaatggattgctcctgtgagaattgaagaacgactgggacgtatt
gcttatgttgagcaaagtgtcgtatttcaatatgaatcaggcaaaattgttgctgtcatt
gtcgttgatttggagaaatgtgcacagaaaaccagtgcagtgcgctattctgaagtttca
ttacatatggaaaatatggctaagaataagcttcatcaaattctggagacagatatcaat
gcagaattggaagatctgcctctttatcagcgaccggtttatgttgctgtgactgataag
ttttttacggtaagcggaggggagctaactgtcaatatgaaggtgcgtcgcagtattgtt
gcacagcggttttcagcgtacttcgaaaatactgtatgtaaatctgatcagggtcgggct
gaaaacggtcatgtagttatgagtgggccaaccattttttttatatga
DBGET
integrated database retrieval system
