Nitrosomonas europaea: NE2573
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Entry
NE2573 CDS
T00130
Symbol
ycbB
Name
(GenBank) putative periplasmic protein
KO
K21470
L,D-transpeptidase YcbB
Organism
neu
Nitrosomonas europaea
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
neu01002
]
NE2573 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
neu01011
]
NE2573 (ycbB)
Peptidases and inhibitors [BR:
neu01002
]
Cysteine peptidases
Family C82
NE2573 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
neu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NE2573 (ycbB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Bap31
Motif
Other DBs
NCBI-ProteinID:
CAD86485
UniProt:
Q82RZ2
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All DBs
Position
complement(2810199..2811935)
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AA seq
578 aa
AA seq
DB search
MTPLHQKSRKAFLSFDQGVSEFRLNYLAIAQYLVFFCFALTVLSAAAENRPVAVSADAIR
EQLAKNAWEGVNEAELIKLRHFYAQRDYQPVWALKEDSGVLLDTALTFIGRADEEGLASS
DYHIETLRRWRAESPDQVSLPLELGTTRSLLALVHDLSNGRLTATLADPDWYVPQRRLDP
VNFLQQSIASVDSAEQLEQVLASLPPNMPQYHTLKRLLVRLRILVAAGTVWTRIPDDIPS
IHPRTRHAAIPLIRQRIREAYSVFEKPEYDIASDDSELYDDQLETAIKAFQYQYGLNTDG
VVGKNTRRAMNMTAVEHIQQLRITLERLRWLPREFSNRYILVNIAGFNLAAIRNNVRVLN
MRIVVGRDYRSTPSFNSRISHLVLNPYWNVPASIASKDLLPKQKHNPDYFASEGIRVFSD
YHYELELDPDAIDWHAFSRSFPYVLRQDPGKRNALGTIKFMFPNPFSIYLHDTPSKSLFQ
RDIRTFSSGCIRLEKPMQLAEFVLGPSFEKANILEKIDSGKTQTVHLPEPIPVYLLYLTA
WNDGQGEVHFSADVYGRDKRALAYARWLQPEPHLSQSF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacccctttacaccagaaatccaggaaagctttcttatcgtttgatcaaggcgttagc
gagtttcgactcaactatttggctattgcacagtatctggtctttttctgttttgcactc
actgttctgtctgctgctgcggaaaaccggcctgtagcggtcagtgcagatgcaatacgt
gagcagctggcaaaaaacgcctgggagggagtgaatgaagcggaactgataaagctgcgg
catttttacgcacaacgcgactatcagccggtctgggctctgaaagaagattctggtgtg
ttactggatacagcactgacctttatcggacgagccgatgaagagggcttggcaagcagt
gattaccatatcgaaacgttacgccggtggcgtgcggaatctcccgatcaggtttctctt
ccgctcgaactgggtacgacccggtccctgctggcgctggtacatgacttgtccaatggc
cggctgacggctaccttggctgatcccgactggtacgttccacagcgacggctcgacccg
gtgaatttcctgcagcaaagtattgcttccgtggattcagcagaacaactggaacaggtg
ctggcgagcttgccacccaatatgccgcaatatcacacgctcaaacggttgctggtcagg
ttgcgtattctggttgctgccggtacggtatggacgcgaataccggatgatattccctcg
attcatccccgaaccagacacgcggccatcccgttgatccgtcagcgtatcagggaagcg
tactctgtttttgaaaagccggaatatgacatcgccagtgacgacagcgagctgtacgat
gaccagctggaaacagcgatcaaagcctttcagtatcagtatggactgaataccgatggt
gtcgtcggtaaaaatacccgacgagccatgaacatgacagcggtcgaacatattcagcag
ctgcgcattacacttgaacggctgcgctggctacccagggaattcagtaatcgttacatc
ctggtcaacatcgccgggttcaatctggcggcaatccggaataatgtgcgcgtgctgaac
atgcgtatcgtggtcgggcgtgattatcgctcaacaccaagtttcaacagccggatttcg
cacctggttctcaacccgtactggaacgtacccgcaagtatcgccagtaaggatttgttg
ccaaaacagaaacacaatccggattatttcgcttccgaagggattcgagtgttttccgat
tatcattacgaacttgagctggatcccgatgccattgactggcacgcgttcagccggtcg
tttccctatgttctgcggcaggatcccggtaaaaggaatgcgcttggcacgatcaagttc
atgtttcccaatcctttcagcatctatctgcacgataccccttcgaaatcgctgttccag
agggatatccgtaccttcagttcaggctgtatccgtctggaaaaaccgatgcaactggcg
gaattcgtactggggccatcttttgaaaaagccaatattctggagaaaatcgatagcggt
aagacacaaaccgtgcatttacctgaaccgattcctgtttatttgttgtatctgaccgcc
tggaatgacgggcagggcgaagtccacttttcagctgatgtctacgggcgcgacaaacgg
gcactggcttatgcccgctggttgcagccggagccgcacctgtcacaatctttttaa
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