Candidatus Nitrososphaera evergladensis: NTE_00352
Help
Entry
NTE_00352 CDS
T03224
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NTE_00352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nev03019
]
NTE_00352
03009 Ribosome biogenesis [BR:
nev03009
]
NTE_00352
04131 Membrane trafficking [BR:
nev04131
]
NTE_00352
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nev04147
]
NTE_00352
Messenger RNA biogenesis [BR:
nev03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NTE_00352
Ribosome biogenesis [BR:
nev03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NTE_00352
Membrane trafficking [BR:
nev04131
]
SNARE
SNARE associated proteins
Others
NTE_00352
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NTE_00352
Exosome [BR:
nev04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NTE_00352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_22
CDC48_2
AAA_14
AAA_33
nSTAND3
Mg_chelatase
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
AAA_lid_PRS2_C
AAA_7
AAA_18
AAA_24
Parvo_NS1
AAA_3
Sigma54_activat
AAA_25
TsaE
AAA_17
Zeta_toxin
NACHT
AAA_30
ATPase
AAA_11
ABC_tran
AAA_19
bpMoxR
DUF815
NB-ARC
PhoH
SLFN-g3_helicase
Bac_DnaA
AFG1_ATPase
Zot
Motif
Other DBs
NCBI-ProteinID:
AIF82434
UniProt:
A0A075MSV5
LinkDB
All DBs
Position
complement(292862..295027)
Genome browser
AA seq
721 aa
AA seq
DB search
MRVAETNAKFVGRGMALVDPKVVEELNLSAGDVLEVSAKGKKSYVLLWSSQRDDYDKKLI
RIDGYTRNNIGVGIDDTVTVQKVSVKKAHQVILAPTEELNIVGLEEHLPELLEGRVVGKG
DIIPLNIMGRRIGFAVTGTSPSDVASLIDSNTEFVIGSVPKSAAKGVPRVSYEDIGGLKN
EVQKVREMIELPLRHPEIFERIGIEAPKGVLLHGPPGTGKTLLAKAVANETNANFYSIGG
PEIMSKFYGESEERLREVFKEAEENAPSIIFIDEIDSIAPKREEVSGDVEKRVVSQLLTL
MDGIKSRGKLVVIGATNRPNAIDPALRRPGRFDREIEIGIPDEQGRLDILMIHTRGMPLT
EDVDLASIARVTHGFVGADLEALSKEAAMRSLRRILPEINLEQPNIPAEILNKIKVTKQD
FEGALRDIQPSAMREVLIQKPNVRWEDIGGLQQVKDELAEAIEWPLKHGDLFTEADVRPP
KGILLYGPPGTGKTMMAKAVATTSEANFISIKGPELISKWVGESEKGVREVFRKARQAAP
CVVFFDELDSIAPRRGGESEGDARVTERVISQMLTEMDGLEDLKGVVVIGATNRPDIIDE
ALLRPGRFDRILEIPIPDKEARRQIFQVHTERKPIDSDVNLDKLVEMTDGMTGADIAAIV
NAAAMSAIKEHVVSSSNKNEGKKAGKLKISMKHFESALDKMKVGRSITKTGAHRTFRGAG
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
ttgagagtagccgaaactaacgcaaaatttgtcggcagagggatggcactagttgatccg
aaagtcgtagaagagctgaatttatctgcaggggatgtattggaagtcagcgccaagggc
aagaaaagctacgtgttactctggtcaagtcagagagacgactatgacaagaagcttatc
cggatagatgggtatacccgcaataacattggagttggaattgacgatactgtaactgta
caaaaagtcagcgtgaaaaaagcacatcaagttattcttgctccaacagaagagctcaat
atcgtcggccttgaagagcacctaccagaactgctggaaggtcgtgtagttggaaaaggt
gacataatcccgcttaacataatgggtagaagaatcggctttgctgtcacaggtacttcc
ccatcagacgtggcatcactaattgacagcaatactgaattcgtaatcggatccgtgcca
aaatccgctgccaaaggagtaccacgggtatcgtacgaagacattggcggccttaagaac
gaagtgcaaaaggtcagggagatgatagagctacctctgagacatcctgaaatatttgag
cgaatagggattgaagcccctaaaggggtactactccatggccctccggggacaggaaaa
acgctgcttgccaaggcggtggccaacgagaccaacgccaatttttactctattggcggg
ccggagataatgagcaagttctacggcgaaagcgaggaaaggttaagggaagtattcaaa
gaggccgaagaaaatgcgccgtcaatcatattcattgacgaaatagactcgattgcgcca
aagagagaggaggtcagtggcgacgttgaaaaaagagtcgtatcgcaactcctgactttg
atggatggcataaagtctaggggcaagcttgtagtaattggcgctaccaacagaccaaat
gcgatcgaccctgcacttagacgccccggcaggttcgacagggagatagagataggaata
ccggatgaacaaggtcgtctggacatactcatgattcacacccgggggatgccgttgacg
gaagacgttgaccttgcatcgattgcgagagtcacacacggctttgttggtgctgacttg
gaagcattaagcaaagaagccgccatgcgctctcttagaagaatactgccagagattaat
ctagagcagccaaacattcctgctgaaatattgaacaagatcaaagtcacaaagcaggac
ttcgaaggggcgctaagagatattcagccctctgcaatgagagaggtcttgatacaaaag
ccaaacgtgaggtgggaggacattggcggactgcagcaagtaaaggatgaattggcagaa
gcaatagaatggcccctcaaacatggcgacctctttactgaggccgatgtccggcctcca
aagggcatcttgctttatggcccgcctggaacgggcaagacgatgatggccaaagctgtt
gcgacaacatcggaggctaatttcataagcattaagggacccgaattgataagcaagtgg
gttggagaatccgaaaaaggcgtcagagaagtctttagaaaggctcggcaagcagcgcca
tgtgtagtattctttgacgagctagattctattgcaccaagaagaggaggagagtcggaa
ggagatgctcgtgtgacagagcgggtgataagccagatgctgacagaaatggacggctta
gaagacctgaagggtgtcgtagttatcggagcaaccaacaggccggacattattgacgaa
gcactgctcaggccgggtaggtttgacaggatacttgagattccaatacctgacaaggag
gcgagaagacagatattccaagttcataccgagagaaagcctatcgattctgatgttaac
ctggacaaactagtggaaatgacagacggcatgacaggggctgacattgccgcaatagta
aatgcggcagccatgtctgcaataaaagagcacgttgtcagcagcagcaacaagaatgag
ggcaaaaaggcgggaaaactaaagatttcgatgaaacacttcgagtctgcattagacaaa
atgaaggtaggaaggtcaataaccaagactggcgctcatagaactttccggggagcaggt
agttaa
DBGET
integrated database retrieval system
